Capsicum annuum (peppers): 107868237
Help
Entry
107868237 CDS
T04646
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X3
KO
K04523
ubiquilin
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107868237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107868237
03051 Proteasome [BR:
cann03051
]
107868237
Membrane trafficking [BR:
cann04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107868237
Proteasome [BR:
cann03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107868237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
Rad60-SLD_2
Dsc3_N
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
107868237
NCBI-ProteinID:
XP_016570352
LinkDB
All DBs
Position
4:complement(13481280..13502211)
Genome browser
AA seq
549 aa
AA seq
DB search
MSMGGGDDTTLAKNSGADSGAGVNINIRCSSGSKFSLQVNLDSTVGSFKSKLVEHANFPV
EQQRLIYKGRILKDDQTLQSYGLEADHTVHLVRGFAPAPSANPASATNAGGPTTAQNAPR
DATPDAGAPFPGSGLGASTFPGLGSGGGSLFGAGLPDFEQVQQQLTQNPDLMRDMMNMPL
FQNFMNNPETIRNLILNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNASTLSGDARNDTGSNPFAALLGAQGGGQG
RQQPNNPPTTGSETPDNLPAPNTNPLPNPWASAGTGAAQTNTTARSNTAGGTRDAPLGLG
GLASPGLEQMLGGMPDTTSLNQMMQNPAVSQMMQSLLSNPQYMNQVLGLNPQLRSMLDSN
PQLREMMQNPEFIRQLTSPETMQQLMTFQQGLASQLGRQQTNQQGQNAGGGALDNAGMEM
LMNMFGGLGTGGLGVPNRPNVPPEELYATQLTQLQEMGFFDTQENIRALTATAGNVHAAV
ERLLGNLGQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgggcggcggagatgatactactctggcgaaaaactccggcgccgattccggc
gccggtgttaatatcaacatccgatgttctagcggttcgaaattctctttgcaagtcaat
ctggattctactgtcggatcgtttaagtcgaaacttgtagaacacgcaaacttccctgtt
gaacaacagagattgatctataaaggacggatcttaaaggacgatcaaacgttacaaagc
tacggtctggaggcggatcacaccgttcatttagttcgaggttttgccccagctccctct
gcaaaccctgcaagtgcaaccaatgctggaggtccaactactgctcagaatgcaccaaga
gatgctactcctgatgcaggcgcaccatttccaggatcaggccttggagcttcaacgttt
cctggtcttggaagtggtggtggtagtttgtttggagctggacttccagattttgagcag
gtccagcagcagttgacccaaaaccccgacttaatgcgagatatgatgaatatgcctctt
tttcagaatttcatgaataaccctgaaaccatccgcaacttgatcttgaacaatccccaa
atgagagagatcatggatcgtaatcctgagcttgctcatgtactcaatgatccagctact
cttcggcagacaatggaggctgcacgaaaccctgaacttatgcgtgagatgatgcgcaat
acagacagggcgatgagcaatatcgaatcttctccagagggatttaacatgctgaggcgc
atgtatgaaaatgtccaagagccattcctaaatgcatcaacattgtctggagatgcgaga
aacgatacagggtctaacccatttgcagctcttttgggagcacaaggtggtggacaaggc
agacagcagccaaataatcctccaactactggttctgagactcctgataatctgcctgct
ccaaatactaatccacttcctaatccttgggcgtctgcaggcactggagctgcccaaacc
aataccactgctagatcaaatactgctgggggtaccagggatgcaccacttggcttaggt
gggcttgcttccccaggtttggagcaaatgctaggtggcatgcctgataccacttcttta
aatcaaatgatgcagaaccctgccgtctcacagatgatgcaatctctcctttcaaatcct
cagtacatgaaccaggttttagggctcaacccacagcttagaagcatgcttgattccaat
ccacagcttagagaaatgatgcaaaatcctgaatttattcgtcaattgacatcgcccgaa
acaatgcagcaacttatgactttccaacaagggcttgcatctcaacttgggcggcagcaa
acaaaccaacaaggccaaaatgctggtggaggagcacttgacaacgcgggaatggaaatg
cttatgaatatgtttggtggacttgggactggtggcttgggtgtccctaacagacctaat
gtgcccccagaggaattatacgctactcagctaactcagttacaggaaatgggtttcttc
gacacacaagaaaatatccgggcactgactgccactgcaggcaatgttcatgctgcagta
gagcgacttcttggaaatctcggacaataa
DBGET
integrated database retrieval system
