Capsicum annuum (peppers): 107869032
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Entry
107869032 CDS
T04646
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107869032
Enzymes [BR:
cann01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
107869032
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107869032
Prokaryotic type
107869032
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
107869032
NCBI-ProteinID:
XP_016571105
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All DBs
Position
4:complement(52694228..52695348)
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AA seq
343 aa
AA seq
DB search
MGKHFYDPKIKSVIFVDAPTSEGNMVIENGDFLSKKVKKRNDESPKVVEERVQESVFIYG
EKEKERFNQILKYYEGTHNFHNFTRRKKDGDPVAKRYILSFNANIIVNVQGIEFMKCEVT
GQNFMLHTIHKMIGLAESIMRNYAPESLIITAFQRDVNIKFPMAPEVGLYLDECFFTSYN
SKWKDTQEEVSLTAYLEMAEEFKMKHIYSHIAIMEHKEGTMGVWLHYLNHQNYPDLRVVD
LVKPADDGLEVVETAIDVGLGVFNNCERTNNVNSTGASDGPDITKTIMEAGLSAANNGER
IDNIDSAGAILEVTETIVQADLGSINNGESTNNVSSTGVSDVS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacacttttatgatccaaaaattaagtcagtaatatttgttgatgcaccaaca
agtgaaggtaatatggtaattgaaaatggagattttttaagtaagaaggtcaaaaaaagg
aatgatgagagtcctaaagtagttgaagaacgggtgcaagagagtgtgtttatctatgga
gagaaagagaaagagagatttaatcaaattttgaagtattatgaaggaactcataatttt
cataatttcacgaggaggaaaaaagatggtgaccctgttgcaaagagatatatcctttca
tttaatgcaaatataatagttaatgttcaaggcattgaatttatgaagtgtgaggttact
ggtcagaactttatgcttcatacaatccataaaatgattggtcttgctgaatctatcatg
agaaattatgctcctgaatcattaattataactgccttccaaagggatgtcaacatcaag
tttcccatggctcctgaggttggattatatttggacgaatgctttttcacctcgtataac
agtaagtggaaggatactcaggaagaagtttctctgacagcttatttagagatggcggaa
gaattcaaaatgaagcatatctatagtcatattgcaataatggagcacaaggaagggaca
atgggtgtatggctgcattacctgaaccatcaaaattatcctgatctgcgcgtcgtggat
cttgttaaacctgctgatgatggtttagaagttgttgaaactgctattgatgttggttta
ggtgttttcaacaattgtgagagaaccaataatgtcaattctactggtgctagtgatggt
ccagacataactaaaactattatggaggctggtttaagtgctgctaacaatggtgagcgt
attgataatattgattctgctggtgctattttagaagttactgaaactattgttcaggct
gatttaggctccatcaacaatggtgagagcactaataatgttagctcaactggtgtaagt
gatgtttcatag
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