Capsicum annuum (peppers): 107870035
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Entry
107870035 CDS
T04646
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cann
Capsicum annuum (peppers)
Pathway
cann02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107870035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cann02000
]
107870035
Transporters [BR:
cann02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107870035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
107870035
NCBI-ProteinID:
XP_047268305
LinkDB
All DBs
Position
5:complement(970176..992981)
Genome browser
AA seq
1904 aa
AA seq
DB search
MEKKEKEKKEMRNSRRQLKAMLRKNWLLKIRHPIVTCAEILLPTLVMLLLIAVRSKSDIR
IHPAQPYIRKGLGMFVEVGKGDASPPFNQVLELLSAKEEYLAFAPNTAETRMMINILSIK
FPILRLVTKVYEDEAELESYLRSDLYAAYDQNKNLTNPKIKGAVVFHEQGPNLFDYSIRL
NHTWAFSGFPDIKTIMDTNGPFLNDLALGVNSVPILQYGLSGFLTLQQIMDSFIIYAAQE
MMTNSLELPSHSHDLDAQLKIPWTQFSPSDIRLAPFPTREYTDNEFQSIVKKVMGVLYLL
GFLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYAIQFALSSVLLTVCTMT
TLFQYSDKTLVFVYFFSFGLSGIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVNDE
TVSMIVKVLASFLSPTAFALGSINFADYERAYVGLRWSNMWRESSGVCFLVSLLMMLLDS
LLYFAVGLYLDKVLHKENGFCYPLRSLLQKCFGRKKPTGDNYASTSEVKFTENFDETSST
DFIKNVSSPRPTLESVSLEMKQQESDGRCIQIRNLRKVYATNRGNCCAVNSLQLTLYENQ
ILALLGHNGAGKSSTIAMLVGLVSPTSGDALVLGKNILTDMDEIRKSLGVCPQYDILFPE
LTVKEHLEIFADLKGVSEDSKEKAVIEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALI
GNSKVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGS
LKCCGSSIFLKHQYGVGYTLTLVKTAPGASAAADIVYRHVPSATCVSEVAAEVSFKLPLA
SSSSFESMFREIERCMRRSNPEFETIGYREVDNLGIESYGISVTTLEEVFMRVAGGDFDQ
AVLLEEKADPNSCDSIDLKVCETNASKTFFRSKLCGNYFGVIWLMVSLIGSACSLIWVAV
SSVIRLVMMPCCCCCILSRSTFWEHSKALLIKRAKSAQRDRKTIVFQLLIPAFFLLLGLL
FLKLKPHPDQQPVFLTTSYFNPLLSGGGGGGPIPFDLTFPIAKEVADHIQGGWIQKYQET
TYRFPDSTKALNDAIEAAGSTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDNQTGDGSLG
YTVLYNSSCQHSAPTFINLMNSAILRLATHNENMTIRTRNHPLPQTASQHQQHHDLDAFS
AAVVINIAFSFIPASFAVAIVKEREVKAKHQQLISGVSILSYWASTYIWDFISFLFPSSF
ALVLFWIFGLEQFIGKDSLIPTVMLFLEYGLAIASSTYCLTFFFSEHSMAQNVVLLVQVF
TGLILMVLSFIMGLINSTKHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKNGSKDNVL
DWNVTGAAISYLAVEAIGYFLLTLGFEFLPQQKRNLYRVREWWKSLGKSRHAPFFGSSEP
LLRPSSGDAASEFDEDVDVKAERDRVLSGSTDNAVIYLRNLRKVYPGGKSQVAKVAVHSL
TFSVQEGECFGFLGTNGAGKTTTLSMLSGEEYPSDGTAFIFGKDIRADPKVARRHIGYCP
QFDALLEFLTVQEHLELYARIKGVPEYDLEDVVTQKLLEFDLMKHGNKPSFALSGGNKRK
LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQAL
CTRIGIMVGGSLRCLGSSQHLKTRFGNHLELEVKPVEVSSIDLENLCLIIQEKLFDIRPH
SRSILNDIEVCIGGTNCIVSEDASAAEISLSKEMIMALGQWFGNEERVKALVSATDDSCK
IFGDQLSEQLARDGGLPLPIFCEWWLAKEKFTKIHSFIQSSFPDATFQGCNGLSVKYQLP
CGEGLSLADVFGYIERNRNQLGISEYNVSQSTLESIFNHLAASS
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggagaaggaaaaaaaagaaatgaggaattcaagaagacagctaaaagct
atgcttaggaagaattggcttctcaaaattagacaccctattgttacttgtgctgagatt
ttactcccaactctcgtaatgctgttgttgattgctgtgaggagtaaatctgatatccgc
atccacccagctcagccgtatatccggaaaggtttagggatgtttgtggaagttggaaaa
ggtgatgcttctcccccttttaaccaagttctggagctactatcggccaaggaggagtat
ttggcatttgcacctaatacagctgagacaaggatgatgatcaacattttgtctataaaa
tttcccatactgaggctagttaccaaagtttacgaagatgaagcagaacttgaatcatat
ctccgttcggatctttatgctgcgtatgaccaaaataagaaccttacaaaccccaaaatc
aaaggagctgtagtatttcatgagcaagggcctaacttatttgattatagcatacgccta
aaccatacatgggcgttctcaggatttcctgatattaaaaccataatggacacaaacggt
ccgtttctgaatgacttggccttaggcgtcaacagcgtaccaattttgcaatatggtctc
agtggatttttaaccctccaacaaatcatggactcattcataatatatgctgctcaagaa
atgatgacgaactcgctagagttacctagccactctcatgatttagatgcccaactcaag
ataccatggacacagtttagtccttcagacattagacttgctccatttccaactcgtgaa
tacaccgataatgagttccagtccattgtcaagaaagtcatgggagtgctgtacttgctg
gggtttctttatccgatttctcgtctaataagttattctgtcttagaaaaggagctcaag
ataaaagagggcctctacatgatgggtttgaaagacgaaatattccatctctcttggttt
ataacatatgctattcagtttgctctttcgtctgtgctacttacagtatgcaccatgacc
acactgtttcaatacagtgataagacgttggtgtttgtgtacttcttttcctttggcctc
agtggaataatgctctcatttatgatttccacattcttcacaagagcaaaaaccgcggta
gctgttgggacccttacttttctcggggcattctttccctattatactgtcaacgacgaa
acagtctccatgatagtaaaagtgctggcttctttcctttcacctacggcctttgcatta
ggatccatcaattttgctgactatgagcgtgcttatgttggactccggtggagtaacatg
tggcgtgaatcttcaggagtgtgttttttggtctctctcctgatgatgttacttgacagt
ctgttatactttgcagttggtctgtatcttgacaaggtcctccacaaggagaacggattt
tgttacccattgcgttcccttcttcagaagtgctttggaaggaagaaacctaccggagat
aattatgcatccacctcggaagtcaaattcactgagaattttgatgaaacgagtagtact
gattttataaaaaatgtatcaagtccaagaccaactctagaatcagtgagcttggagatg
aagcagcaagaatccgatggcagatgtattcagatcaggaacctgcgaaaggtgtatgcg
acaaaccggggaaactgctgtgctgttaattctttacaactaactttatacgagaatcag
attctggcacttttaggacacaatggggctggtaaaagtagtacaatagcgatgcttgtt
ggtctcgtttcccctacttctggagatgctctggtattggggaaaaacatcttaaccgac
atggatgaaatacggaagagtttgggagtctgccctcagtatgatattcttttcccagaa
ttaactgtgaaggaacatttagaaatattcgctgatttaaagggtgtttcagaagattct
aaggaaaaggctgtgattgaaatggttgatgaagttggattggcagacaagcttaatact
gttgttaaagctctttccggaggtatgaaaaggaagttgtcccttgggatagctcttata
gggaacagtaaggttattattctcgatgaaccgactagtggaatggatccatactctatg
cggttaacttggcagctgattaaaaggaaaaagaagggaagaatcatattacttacaaca
cactccatggacgaagctgatgtgctaggagatcggattgctatcatggccaatggttct
ctaaagtgctgcgggagttcaatcttcttaaaacatcagtatggggttggttacactctt
actcttgttaagactgctccaggtgcctcagcagctgctgatattgtttaccgtcatgta
ccttctgcaacatgtgtgagcgaggttgctgcagaggtgtccttcaagcttcccctagca
tcctcatcttcatttgagagcatgtttcgggaaatagagcgctgcatgagaagatccaac
cctgaatttgaaacaataggctatagagaggtagacaatcttggcattgagagttatggc
atatctgtcacaactttggaggaagtgtttatgagggttgctggtggtgactttgatcaa
gcagtgctccttgaggagaaagcggatccaaattcatgtgattccattgatctaaaagtg
tgcgaaactaatgcttcaaagacattcttccgttccaaattatgtggaaactattttgga
gtcatttggcttatggtgagcttaatcggttcagcttgtagtctaatctgggttgcagtt
tcaagtgtcattaggcttgtgatgatgccgtgctgttgctgttgtatactgtcaagatct
actttctgggaacactcgaaagccctacttattaagagagcgaaatcagctcaaagagat
cggaaaacaattgtattccagctgttaattcctgctttctttttgcttcttggtctgctg
tttcttaagcttaagccacatcctgatcagcagccggtcttcttaacgacctcgtacttt
aatcctttattaagtggcggtggtggaggtggtcccattccttttgacctcacctttcct
atagcaaaggaggttgccgatcatatccagggaggctggatccaaaagtatcaggagaca
acgtacaggtttcctgattctactaaggcgttgaatgacgccatagaagcagcaggatca
actttgggtcctgtcctactttcgatgagtgaatatctgatgtctagctttaatgaatct
tatcagtcgaggtatggagcgatagtcatggataatcagactggtgatgggagccttggg
tacactgttctatacaacagttcttgccagcattctgctccaacatttatcaatttgatg
aattccgcaatacttaggctagctacacataatgaaaatatgactattcgaactcgtaac
caccctttgccgcagacagcaagccagcatcagcaacatcatgatctggacgctttctct
gctgcagttgtaatcaatatagccttttcttttattcctgcctcattcgcggtggcgatt
gtcaaggaacgtgaagtgaaagctaagcatcaacagctaatcagtggggtgtccatactc
tcatattgggcttccacttatatatgggatttcatcagcttcttatttccttcatcgttc
gcattagttctattttggatatttggtcttgagcaatttattggaaaggattctctaatc
ccaacagttatgttgtttctcgaatatggactagcaattgcttcatcaacatactgcctc
acattcttcttttccgagcacagcatggctcagaatgttgtcctcctcgtccaagttttc
actggcctcattcttatggttctttcctttataatgggacttataaattcaacgaaacac
ttaaattctctgctcaagaacttctttagattgtcaccgggattttgcttcgctgatgga
ttagcttcattggcgcttttaagacaagggatgaagaatggatctaaggataacgttctt
gactggaatgtgactggtgctgccatatcatacttggctgtcgaggctattgggtatttc
cttttaacgctgggatttgaattcttgcctcaacaaaaaaggaatctttacagagttcgt
gagtggtggaaaagcttgggaaaatctaggcatgctcctttctttgggtcttcagaacct
cttcttcgaccatcctcaggggatgctgcttccgaatttgacgaagacgtagatgttaaa
gcagagagagatagggttttgtctggctcaactgacaatgcagttatctatcttcgtaat
cttcggaaggtctatcctggagggaagtcccaagttgcaaaagttgctgtccattcgctg
actttctctgttcaagaaggcgagtgttttgggttcttaggaactaatggagcagggaag
acgacgaccctgtccatgctatctggagaagaataccctagtgatggaacggccttcatt
tttggtaaagatatacgtgcagatcccaaggttgctcgtagacatatcggatattgtcct
cagtttgatgctttactcgaatttctaaccgtccaagaacatcttgagctctacgcaaga
attaaaggagtaccggagtatgatctcgaagatgttgttacacaaaagttgctcgagttt
gacctgatgaagcatggaaataaaccatcttttgccttaagcggaggaaacaagcgcaag
ttatctgttgcaattgcaatgattggagatcctcctattgtcattcttgatgagccatcc
acaggtatggatcctattgccaagcgtttcatgtgggaggttatatctcggctgtcaact
agacgaggaaagaccgctgtaattttaaccactcacagcatgaacgaagctcaagctctg
tgcacaagaatcgggataatggttggaggcagtttacggtgtcttggtagttcgcagcac
ttgaaaactcgcttcgggaatcatcttgaactagaggttaaaccagtcgaagtcagctct
atcgatctggaaaatctctgcttgataattcaagaaaagctattcgatattcgtcctcat
tctcggagtatactaaatgacattgaagtttgcataggaggtactaactgtatagtctcg
gaagacgcctcggcggcagaaataagcttatcgaaggaaatgatcatggctcttggacaa
tggtttggcaatgaagaaagggtgaaagcattagtatctgcaactgacgactcttgtaag
attttcggtgaccagttgtcagaacagttggctcgtgatggtggactcccgttgccgata
ttctgtgagtggtggttggctaaggagaagtttaccaaaatccattcgtttattcagtct
tcgtttcctgatgcaacatttcaaggttgcaatggattgagtgtcaagtatcagctgcct
tgtggagaaggtctttcactcgctgatgttttcgggtacatagagaggaacagaaaccaa
ctcgggatatcagaatacaacgtcagccaatctacacttgagtcgatattcaatcattta
gcagcaagctcctga
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