Capsicum annuum (peppers): 107870183
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Entry
107870183 CDS
T04646
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107870183
Membrane trafficking [BR:
cann04131
]
Protein recycling
Others
EARP complex
107870183
Endosome - Golgi transport
Tethering complex
GARP complex
107870183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
COG7
Vps54_N
RINT1_TIP1
COG5_N
HemX
DUF401
HTH_Cmi2_C
MPH2
XhlA
UPF0515
Motif
Other DBs
NCBI-GeneID:
107870183
NCBI-ProteinID:
XP_016572106
UniProt:
A0A1U8GLF6
LinkDB
All DBs
Position
1:26510487..26576152
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AA seq
824 aa
AA seq
DB search
MEKQNTLDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILTAVRQQSNSGTKAREDLA
AATSVVQELMNKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRHYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQVLKSHVFSD
FSSLGTGKETEESNLLQQLSDASLVVDALEPSVREELVKIFCNRELTSYQQIFEGAELAK
LDKTERRYAWIKRRLRTNEEIWKIFPRSWHIDYLLCIQFCKLTRSQLVEILVSMKEKPDV
ATLLTALQRTLEFEEELAEKFGGGTRSKDAVDDNEETEMSGNKSQTVSDIRKKYEKKLAT
HDGSQHEELHGEKDSSVPGAGFNFRGIISSCFEPHLSVYIELEEKTLLDSLEKEMLEETW
EIEEGSQTNILSSSIKVFVIIRRSLKRCSALTRNQTLFNLFKAFQKVLKAYATKLFARLP
KGGTGIVAAATGIEGQIKTSDKDERVICYIVNTAEYCHKTCGELADNVSKLIDAQFADRV
DMSEVQDEFSAVITKSLITLVHGIETKFDSEMAAMSRVPWSTLESVGDQSDYVNGINLIL
TSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYLNVFKCKQISETGAQQMLLDTQAVKTIL
LEIPSLGKQTAGAASYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTLTEFQRL
LELKGLKKADQQSILDDFNKRGSGICQPTIMASSVVTSTPNTSIAPTITNAAASPGAIIS
REDVLTRAAALGRGAATNGFKRFLALTEAAKDRKDGPFRKLFNG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcagaatacgttggattacatcaaccagatgtttcccacagaagcgtctcta
tctggcgttgagccccttatgcagaagatacatagtgaaattcgtcgtgtcgatgctgaa
atattgactgctgttcggcaacagagtaactctggtaccaaagccagagaagatcttgct
gcagctacgagtgttgtgcaggaactcatgaataagattcgagaaattaaaaccaaagca
gagcaaagtgaaacaatggttcaagaaatatgtcgcgatattaagaaattggattttgca
aagaagcacataacaacaacaattactgcccttcaccgcctaaccatgctagtctctgca
gtagagcaactgcaagtaatggcttccaaacgtcactataaagaggcagctgcacagctt
gaggctgtgaaccagctctgtagtcattttgaagcctatagggatattcctaagattaca
gaacttagagaaaagtttaagagcatcaaacaagtcctcaagtcacatgtgttctctgac
ttctccagtttaggcacagggaaggagacagaagaaagtaatctattgcagcagttatca
gacgcgtccttagttgttgacgctctcgagccttctgttagagaagagttggtgaaaatt
ttttgtaatagagaactcacctcgtaccagcagatatttgaaggagcagaactagctaag
ttggacaaaactgaaagaagatatgcttggatcaagcgtcggctaagaacaaatgaggag
atatggaaaattttccctcgttcatggcacatcgattatttgctttgcattcagttctgc
aagttgacaaggtctcaacttgtggaaatccttgttagcatgaaagaaaagccagatgta
gcaaccttgttgacagctctgcagcgcactttggaatttgaagaggagttagcagagaaa
tttggtggtggaacccgcagtaaagatgctgtagatgacaatgaagaaacagaaatgagt
ggaaacaagagtcagacagtttcagacattcggaaaaagtatgagaaaaagcttgctacc
catgatggtagtcaacatgaagaactacatggagaaaaagattcatcagtcccaggagct
ggtttcaatttccgaggcatcatctcgtcgtgctttgaacctcacttgtcagtttatata
gagctggaagagaaaactcttctggacagtttggagaaagaaatgctggaagagacatgg
gaaattgaggagggaagtcagactaatattttgtctagcagcattaaggtctttgtaatc
atcaggaggagcttgaagcgatgcagtgctttgacgagaaaccagacattgtttaatctc
tttaaggcatttcaaaaagttcttaaagcttatgctacaaagctcttcgctagattgcca
aagggcggtacaggaattgttgcagctgccactggaatcgaaggacagataaagacttcg
gacaaggatgaaagggttatctgctacatagtaaatactgcagagtattgtcacaaaacg
tgcggagaattggctgataatgtgtcaaaactgattgatgctcaatttgcggatagagtg
gatatgtctgaagtacaggatgaattttcagctgttattacaaaatcattgattacatta
gtgcatggaatagaaacaaagtttgactctgaaatggcggcgatgagtcgggttccatgg
agtactcttgaaagtgttggtgatcagtcagactacgtcaatggcataaatttgatcctt
acgagtagcattccagtgcttggaagtcttctctctcccatttatttccaattcttcctg
gataagcttgcgtcatctcttggtccacggttctatcttaacgtcttcaaatgcaaacag
atatcagagactggagcacagcaaatgcttttggatacacaagcagtaaaaactattttg
ctggaaattccttctttggggaaacaaacagcaggagctgctagctactcaaaatttgtc
agtcgtgagatgagcaaagcagaagcattattgaaggtcatactgtctccaatagattct
gtggcggatacatactgtgcgctgcttccagagggaacgctcacagagtttcagcgtctt
ttagagcttaagggtctgaaaaaagctgatcagcagagcatactggatgacttcaacaaa
cgtgggtcaggcatctgtcagcctaccattatggcctcttcagttgtaacatctactcca
aacacctcaatagcaccgaccataactaatgcagcagcatcacctggggctatcatttca
agagaagatgtgctgaccagagcagctgctcttggaagaggtgcagctacaaatggcttt
aagagattcctcgctttaacagaagctgcaaaagatcgcaaggatgggccattcaggaag
ttattcaatggatga
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