Capsicum annuum (peppers): 107870250
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Entry
107870250 CDS
T04646
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107870250
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107870250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
tRNA_Me_trans_M
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
107870250
NCBI-ProteinID:
XP_016572202
UniProt:
A0A1U8GLR9
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Position
5:complement(218084200..218093332)
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AA seq
1316 aa
AA seq
DB search
MKNLKILKEELVNLSLNSEDEIISFAAFDLERNRVFLASSSNFIYNLLLPSSSNNAGAWN
SISDNLIDLEPGDFITSMDYLMEKEALIIGTSYGLLLLYTADDNMTQIVGRLEGGVKCIS
PSPDGDLLGVITGFGQILMMTPDWDVLYEMALDDLPEDIDVHEHTYSSNYSSESPISWRG
DGKYFATLSRVNNSQPLHKKLKIWERDSGVLHSVSESNPFMGSTLDWMPSGAKIAAVYDQ
KEDRKCPSIVFFERNGLQRSSFCLNVEIDATVELVKWNCNSDLLAAVVRGEKYDSLKIWF
LSNNHWYLKQEIRYMKDDRVRFMWDPIKPLQLVSWTISGHITTYNFVWNTAVMNNSVGLV
IDDSKILVTPLSLSLIPPPMYLFCLKFPSAIQSMTFCSKSSMNHLAASLSDGRLCVVELP
AIDCWEELEDKEFDMEACSFDSGYKSFIHLAWLDSHKLLGVSHNQISNSAIKESSKDELS
MYCLQEIELMCSEDRIPNSVTCSGWQAKGLNRLSLEGTVIGIVPDQENGCSAYVQFDGGK
VFEYALKVADARGLHQKRDDMSFSSSCSWMDLVQIGGCLPQKSLLFGLDENGRLLVGERT
LCNNCSSFSFYSNSADHTVTHLILATKQDLLFIIDISDVLKGELEVKYGNFLPVFKRRKG
EDERNYIQIWERGARIVGVLHGDESAIILQTVRGNLECIYPRKLVLASIINALIQGRYKD
ALLMVRRQRIDFNVIIDHCGWQIFVRSAAEFVKQVNNLSYITEFVCSIKNENIMETLYKN
YISLPHDNEAKAVEHGDLKSSHSNSKINSVLLAIRKALEEHVTESPARELCILTTLARSD
PPALEQALERIKLIREKELSGSDDLRRELYPSAEEALKHLLWLSDSEAVFEAALGLYDLN
LAAIVALNSQKDPKEFLPYLQELENMPPVLMQYNIDLRLQRFESALQHIVSAGDSYFEDS
MTLMKKNPQLFPSGLQLIIDSVKRNKVLEAWGDHLSSTKCFEDAAATYLCCSCLDKALKA
YRECGNWGGVLTVAGLIKLGKEEVLQLAQELCEELQALGKPGDAAKIALEYCADVGAGIN
FLVSAREWEEALRTAFLHRRDDLVLEVKTASLECASSLVSEYEEGLEKVGKYLTRYLGVR
QRRLLLAAKLQSDERSINDLDDDTASETSSNFSGMSAYTLGTRKGSAASINSKASTKARE
MRRQRNRGKIRAGSPGEELGLVEHLKGMALTSGAKRELRSLLICLVMLQKEDIAKKLQHV
ATNFQLSQMAAVKLADEAMLNDRVNEHFYVLDNYIPKIKEEMQHSELFSWQSKVLI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgaagatattgaaagaagagttggtaaaccttagtttaaattcggaagat
gaaattattagcttcgcagcatttgatttggagcgaaatcgggtcttcttagcttcatct
tcaaatttcatttacaatttactccttccatcttcatctaataatgcaggagcttggaat
tccatatcagataaccttattgatttagagcctggggatttcattacttccatggattat
ttaatggaaaaagaagcattgattattgggacttcgtatggtcttctattgctatacact
gcagatgataatatgacacaaattgttggccggttggagggtggagtaaagtgtatctca
cctagtccagatggagatcttcttggtgtaattactggttttggacagattctaatgatg
acacctgactgggatgttttatatgagatggcacttgatgatctgcctgaagatattgac
gtacatgaacatacttactcttcgaattattcgtcggagagcccaatttcatggcgaggt
gatggaaaatactttgcaacactaagcagggtgaataattctcagcccttgcataagaag
cttaaaatctgggaacgggactcaggggtgctccattctgtttcagagtcgaatcctttc
atggggtcaactttggattggatgcccagcggagcaaaaattgctgcagtttatgaccaa
aaggaagatagaaaatgcccatcaatagttttctttgagaggaatggattacaaagaagc
tcattttgcctcaacgtagaaattgatgctactgtagaacttgtgaagtggaattgtaac
tcagaccttctagctgctgtggtcagaggtgaaaagtacgactctctgaagatctggttc
ttaagtaacaaccactggtacttgaagcaagaaatcagatacatgaaggatgatagagtc
agattcatgtgggatccgataaagcctctacagttggtttcttggactattagtgggcat
atcacaacctacaactttgtctggaatacagctgtcatgaataactcagtgggacttgta
attgatgactccaagatactagtaacccctctttctttatctctcatcccaccacctatg
tacctcttttgtttgaagtttccctctgccattcagagtatgacattttgctctaaaagt
tctatgaatcacctggctgcatccctgtcggatggcagattatgtgttgtagagcttcct
gcaattgattgttgggaggaactagaagataaagagtttgatatggaggcttgttctttt
gattcaggatataaatctttcattcaccttgcatggttggattcacataagcttcttggt
gttagtcataatcaaataagcaactcagcaataaaggagtcctctaaggatgagctttct
atgtattgcctccaagaaattgagcttatgtgttctgaagatcgcattcctaattcagtg
acatgctctggttggcaagctaaaggtttgaatagattatctcttgaaggtactgtaatt
ggtatagttcccgaccaggaaaacggctgctcagcatatgtccagtttgatggtgggaaa
gtgtttgagtatgcattgaaggtggctgatgccagagggcttcatcagaaacgtgatgat
atgagtttttcttcatcttgttcctggatggatcttgttcaaattggaggttgtttgcct
cagaaatctttgctttttggtctcgatgagaatggtagattgcttgttggtgaaaggact
ttgtgcaacaattgcagcagcttttccttctactcgaattctgctgaccacactgtcacc
catttgattcttgcaactaagcaggatttactgtttatcattgatattagtgatgtcctg
aaaggagaactggaggttaagtatgggaacttcctgccagtttttaagcgcagaaaagga
gaagatgaaagaaactatattcaaatatgggaaagaggtgcgagaattgtaggtgttttg
catggcgacgagtctgctatcatacttcaaacagttcgagggaatcttgagtgcatctac
cccagaaaattggtcctagcctcaataattaatgctttgatccaggggcgttacaaagac
gcgttactcatggtaagaaggcaaagaattgatttcaatgttattattgaccactgtggt
tggcaaatctttgttcggtcagctgctgagtttgtcaagcaggtgaacaatttaagttac
ataactgaatttgtctgttcaataaagaatgaaaatatcatggagacactgtacaaaaac
tatatatccctacctcatgacaatgaggctaaagctgtagaacatggggaccttaagagt
tctcacagcaacagcaagatcaactctgtcttgctggccataaggaaggctcttgaggag
catgtaacggaaagtcctgcaagggaactctgcattctaaccactttagcacgaagtgac
cctccagctcttgagcaagctttagagagaattaaattaatccgagaaaaggaattatcg
ggttcagatgacctgagaagggagctctacccttctgctgaggaagctttaaaacatctt
ttgtggttgtctgattcagaggcagtttttgaagctgcattaggtctttatgatctgaac
cttgcagctatcgttgccttgaattcacaaaaggatccaaaagaatttcttccttatctg
caagaactggaaaacatgccaccagtgttaatgcaatacaacatagaccttaggttgcag
aggttcgagtctgcacttcaacatattgtttctgcaggagattcttactttgaggattcg
atgactctcatgaagaaaaatccccaacttttcccctcgggactccaattgatcatcgac
tctgtcaagagaaacaaggtacttgaggcctggggagatcatcttagttccacaaaatgc
ttcgaggatgctgctgcaacatatttgtgctgttcttgtttggataaagctttgaaagct
tatcgtgagtgtggtaattggggtggggttctgacagtagctggtcttattaaacttggg
aaggaggaggtgttgcaactagcacaggagctttgtgaggaacttcaagcacttggtaaa
ccaggggatgccgccaaaatagctttggagtattgcgcagatgttggtgctggtattaat
ttcttggtcagcgcaagggaatgggaagaagctttgaggactgcatttcttcacagaaga
gatgatttggtcctggaagtgaagacagcatcacttgagtgtgccagctcattggttagt
gaatatgaggaagggttggagaaagtggggaagtacttgactcgctatttaggtgttcga
caacggagattattacttgctgcaaagctacagtcagatgagcgatcaataaatgatctt
gatgatgatactgcttctgaaactagtagcaatttcagtggaatgagtgcatataccttg
gggacaagaaagggatcagctgcatctatcaactccaaagctagtacaaaagcgagagag
atgagacgtcaacgaaatagagggaaaatacgtgctgggagtcctggtgaggagttgggt
ttggtagagcacttaaagggaatggctttgactagtggagctaagcgtgagcttagatct
ctcttgatatgccttgtgatgctgcaaaaggaagatattgccaagaagttgcaacatgtt
gctacaaattttcaactgtcccaaatggcagctgtaaaattagccgacgaggccatgcta
aatgatagagttaatgagcatttctatgttctggacaattacattcccaaaataaaagaa
gaaatgcagcattctgagctgttctcgtggcagtcaaaagtattgatttga
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