Capsicum annuum (peppers): 107870304
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Entry
107870304 CDS
T04646
Name
(RefSeq) protein PELOTA 1 isoform X3
KO
K06965
protein pelota
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107870304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107870304
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107870304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
107870304
NCBI-ProteinID:
XP_016572281
LinkDB
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Position
5:9339722..9349561
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AA seq
378 aa
AA seq
DB search
MKIVRKDLVPDGPGSVKIIPEEADDMWVAYNLIAEGDTVLAVTVRKVLREAASGGRDAER
VKLKLEIKVENIEYDKEGSALRIRGKNILENEHVKIGAFHTLEIEPHRPFVLRKVVWDSL
AREVLRQAADPSVSADLAVVLMQEGLAHILLIGKSLTITRSRIETSIPRKHGPAIAGYDK
ALNKFFGNVLQAFVRHVDFKVVRCAVIASPGFTKDQFHRHLLLEAERKQLRPIIENKSRI
LLVHTTSGYKHSLKEVLDAPNVMNMIKDTKAAKEVQALKEFFNMLSNDPDRACYGPKHVE
VAHERMAIQTLLITDELFRSSDVETRKKYANLVDSVKDSGGTALIFSSMHVSGEQLTQLT
GIAAILRFPLPELEDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgttcgaaaagaccttgttcctgatggccctggtagtgtcaagataattcca
gaggaagcagatgatatgtgggttgcttataatttgatagctgaaggtgatactgttttg
gctgttactgtcaggaaggtcctaagggaagctgcttctggaggaagagatgctgaacga
gtgaaactgaaattggaaatcaaagttgagaatattgagtatgacaaagaaggttctgcc
ttgcgtattcgtgggaagaatatcctggagaatgaacatgtaaagataggcgcttttcac
actctggaaattgagccacacagaccttttgtgctaagaaaggtggtctgggactcactg
gcacgagaggttcttcgtcaagctgctgatccttctgtaagtgctgatctggctgttgtt
ctgatgcaagaaggattggcacacatacttcttattggtaaaagcttgactattactcgt
tctcgtatagagacttctataccacgcaagcatggaccagcaattgcaggttatgataag
gcgttaaataagttctttggcaatgttctacaggcctttgtcaggcatgttgatttcaaa
gtagttcgctgtgctgtgattgcaagtccaggattcaccaaggatcaatttcatcgtcac
ctgttgttagaagccgagaggaagcagctaagacctataatagaaaataaatcacgcata
cttcttgtccatacaacctcaggatacaaacatagtttgaaagaggttctggatgcccca
aacgtaatgaatatgataaaagatacaaaagctgccaaagaggttcaagctctaaaggaa
tttttcaacatgctttcaaatgatcctgatcgtgcatgctatggaccaaagcatgttgaa
gttgctcacgagcgaatggctatccagacacttctcattaccgacgagctctttaggagt
tctgatgtagaaacgaggaaaaagtatgctaatctggttgattcagtcaaggattccggt
ggtactgcactcattttctcatcaatgcacgtttcaggagaacaactgacacagctaacc
ggcattgctgcaatccttcgttttcctttgccggagctggaagacattgagatgtga
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