Capsicum annuum (peppers): 107870438
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Entry
107870438 CDS
T04646
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107870438
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
107870438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
BURAN
LAIKA
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
107870438
NCBI-ProteinID:
XP_016572460
LinkDB
All DBs
Position
5:22360510..22375832
Genome browser
AA seq
1362 aa
AA seq
DB search
MYPSRGSNVYGQQSYSSQSSYGQSLGHGYSGSSAGGPERSSQLPTGSRHSSMLGPPQDAE
MSAYTTHGHHPSTVPNYGGQYSSVYGSTAQQMPTAGGKGSASSALESRSGFGVDSPKFMA
GDYVSSSSHGYGHKAEQQYSDRITDYPTLDRHQYVERHSSYGGRDLTSEQASRYPDSISF
GLKHQAERYEHMDQASIIRQEQILKSQALQSPTVDGGSRQVEYLAARSAAVCHAVQDPIS
YSGRIDSGPRTLSTLLAGQHAPSILGAAPQRAVEDVMYVQNSTNPGYGVSLPPGRDYGIG
KGLHATSVDPDYPSSVLAHAGHSRLDDYKDVYSRELERREKDRHSSREREKDRERAKDRE
RERDRDRERERERERDRERERERDRERERERQRQRERDRERALERKEKEKDHKRKRGAEV
KHDRTPPRSSRDRRGSSLSKDSKSTRRESPRPDVLHRHHTPVKRREYFCKVYSSSLVEIE
RDYLSLDRRYPRLFISPECSKVVVNWPKGNLKLSLHTPVSFEHDFVEGDAATALKRLSSK
PSAGEPEKSEPGTTIWNAKVILMSGLSRNSLEELSSDRNYDDRIPHVCNLLRFAVLKLEN
SLMTIGGQWDSVDGGDPSCDDSSLIQTALRHAKDIANLDLKNCQQWNRFLEIHYERVGKD
GRFSHKEVTVYFVPDLSECLPSLESWREHWSTKKKAIAEREKELALRKEKSGEKESQKDA
KQGPRSERNSTAGLSAEGSKKENDGRLKENIADKEGSEKKVGESKQAFETCKVVNDNAEL
NPGKSAAIETDGSAKSVKKRIIKRIVKQKVSNKKDLETTQKVKDKVDSKETGEGNMSAEI
ASPLGESATPPVKTFTRKKIVKKVPMVKTPTEDGLKPPDIGIVKEAESSEDKVNSKTGGD
STSVKQDAVVKQDTVVKKTVKRKIIKRVPKRKAASTDTNNGVTGVGSLKDDVKEEKLVQA
KSEVQNVGNNNAENAVCVNVVNQEQKVSPKTKSKIADVKQETKEEINLDGSKKVSKTDKL
KGKEDPKETGKKDKDGKILSKSKSTKEIKEKRSEDPPRHPGFFLQTKGSKDMKLRSLSLS
LDSLLDYTDKDIEESRFELSLVAESLYEMVYYNMASRLLPFLQKLRSKFLIKRNQQKRQR
EESSKKKGVEKSAKRAKTDERTEDAKSVKTESDGKHDQEDEKSPVKEEVTSLNNAEETMI
PDEDANDDSEMDEDPEEDPEEESEMQETSPQDGHAKEAKENAEEVRTDADTGGERTGNSK
DGGVPEIKPILKSGSKEETTKVEKSTKPTLGEVGKELLQAFRFFDRNRAGFIRVEDMRLI
LHNLGKFLSHRDVKELVQSALIESNTGRDDRILYKKLINMDL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtatccttctcgaggaagtaatgtgtatggacaacaatcgtattcttcgcaatcatcc
tacggacaaagtttgggacatggttactcggggagttctgctggagggcctgagaggtcc
tctcagctgcccacaggttcacgacattcctcaatgttaggacccccccaagatgcagaa
atgagtgcttacacaactcacggtcatcatccatcaacagtgcctaattatggtgggcaa
tatagctctgtgtatggttccactgctcagcagatgcccacagctggtggaaaaggatct
gcatcatcagctttggaaagccgcagtggctttggtgtggattcaccaaagttcatggca
ggtgactacgtttcatcatccagccatggatatggtcataaagctgaacaacaatattct
gataggattactgattatccaacccttgatagacaccaatatgttgaacgacatagctct
tatggcgggagagatctgacaagtgagcaagccagtcgatatcctgattcaatttctttt
ggtcttaagcatcaggctgaaagatatgagcatatggatcaagcatctataatacgacaa
gagcaaatactgaagtctcaggcattgcaatctcctaccgttgatggaggatctagacaa
gttgaatatcttgcagcaaggagtgctgctgtttgtcatgcagtccaagatcccatatct
tatagtggcagaattgactcaggtcctcgcactttatcaacattacttgctgggcaacat
gctccttctatcctaggggcggcaccacaaagagctgttgaggatgtcatgtatgttcaa
aattctacaaatcctggctatggagtgagcctgcctccaggtagagactacggtataggg
aagggacttcatgcaacttccgttgaccctgactatcctagcagcgtcttggcacatgct
ggtcactcaaggttagatgattacaaggatgtctactctcgggagcttgagcgaagggag
aaagatcggcactcttcacgcgagcgagagaaagatcgagaaagggcgaaagatcgagag
agggaacgggatcgagatcgggagcgggagcgggaaagagaacgagatagagaaagagaa
cgagaacgggacagagaaagagaacgagagcggcagcgacaacgagagcgtgatcgtgaa
cgtgctttggagcgtaaggagaaggaaaaagatcataagcgcaaacgtggagctgaagta
aaacatgatcgaacacctcccaggagttctagggatcggcgaggatcatctttgagcaag
gacagtaaatctacacgacgagaatctccacgccctgatgttttgcataggcatcataca
cctgttaaaaggagagagtatttctgcaaggtttattcctccagtttggttgaaattgag
agggattatctgtcactggataggcggtatcccaggcttttcatatctccagaatgctcg
aaggtggttgtaaattggccaaaaggcaatcttaagctttctttgcatactcctgtcagt
tttgagcatgattttgttgaaggagatgctgcaacggcgctgaaacgactgtcatcgaaa
ccgtctgctggtgaacctgaaaaatcagaacctgggacgactatatggaatgcaaaggtg
attttgatgagtgggctcagcagaaattctctggaagagctgtcgtcagatcggaactat
gatgatcgaatacctcatgtttgcaatctgcttaggttcgctgttcttaagctggaaaat
tctttgatgactatagggggccagtgggatagtgttgatggtggggatccatcatgtgat
gactcctctttgattcagacagctcttagacatgcaaaggacatagctaatcttgatttg
aagaactgccagcagtggaaccgtttccttgagatacactatgaaagagttggaaaagat
gggcggttcagtcataaagaagtcactgtttacttcgttccagacttgtctgaatgcctc
ccttcattagaatcatggagggagcactggtctactaaaaaaaaggctattgccgagaga
gaaaaggaacttgctctgaggaaagagaaatcaggagagaaggaaagccagaaagatgct
aagcagggtcccaggtcagagagaaactcaacggctggattgtcggcagaaggaagcaag
aaggagaatgatggcagactgaaagagaacatagctgataaagaaggttctgagaaaaaa
gttggagaaagtaaacaagcttttgaaacttgtaaggtggtaaatgataacgctgaactg
aatccaggaaaaagtgctgctattgaaactgatggtagtgcaaagtcagttaagaagaga
attataaaaagaattgttaaacagaaggtctccaataagaaagacttggaaaccactcag
aaagtgaaggataaggtggatagtaaagaaactggggaaggaaatatgagcgcagagatt
gcttctccgcttggagaatctgctacccctccagttaaaacttttacaaggaagaaaatt
gtaaagaaggttcccatggtgaaaactccaacagaagatgggttgaaacctcctgatata
ggaattgtcaaggaggcggaatcttcagaagataaggtgaatagtaaaactggtggcgat
agtacgtctgtcaagcaggatgctgttgtcaagcaggacactgttgtgaagaaaacagtt
aagagaaaaataattaagagggttcccaaacgaaaagcagcatctacagacaccaacaat
ggggtcactggtgttggtagtctcaaagatgatgtgaaagaggagaaattagttcaagct
aaaagtgaggtgcaaaatgtgggtaataataatgcagaaaatgcagtgtgtgtgaatgtt
gtcaaccaagaacagaaggttagcccgaaaacaaaatcaaaaatagctgacgtgaagcaa
gagactaaagaagagataaatcttgatggatccaagaaagtgtccaaaacagacaagcta
aaaggaaaggaagaccccaaagaaacaggaaagaaggacaaggatgggaaaatcctttcg
aaaagcaaatcaacgaaagagatcaaagaaaagagaagtgaagatcctcctcggcaccct
ggattttttcttcaaactaaagggagcaaggatatgaagttgcgatcattgtctctttca
ttggattctttgctggattatactgacaaggatattgaagagtcgagatttgagctttca
cttgttgcggaatccctgtatgaaatggtttactacaacatggcttctcgtctcttacct
tttcttcagaaattacgctccaagtttttgatcaagcgaaaccagcagaaaagacagaga
gaagaatcgtccaagaagaaaggtgtggaaaaatcagccaagcgtgcaaagacggatgaa
cgtacggaggatgccaaatctgttaaaactgaatcagatggcaaacatgatcaagaggat
gagaaatcacctgtcaaggaagaggttacttcgttaaataatgctgaagagacaatgata
ccagatgaagatgcgaatgatgactctgagatggatgaagatccagaggaagatccagag
gaagaatctgaaatgcaagaaacaagcccacaggatggccatgctaaggaggcaaaggaa
aatgctgaggaagtgcgaacggatgctgatactggaggtgaacgaactggaaacagcaag
gatggaggagttcctgagataaagccaattctgaagtcaggcagcaaagaagagacgaca
aaggtggagaaaagtactaaacctactcttggtgaggttggcaaagaattgttgcaggct
ttcaggttttttgacaggaaccgagcaggttttattagggttgaagatatgagattaatc
ctccacaacttggggaaattcctttctcacagagatgtcaaggaacttgtgcaaagtgca
cttatagagagcaacactgggagagatgaccgaattctctacaagaagttgatcaacatg
gacctctga
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