Capsicum annuum (peppers): 107870839
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Entry
107870839 CDS
T04646
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03010
Ribosome
cann04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
107870839
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107870839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cann03011
]
107870839
04121 Ubiquitin system [BR:
cann04121
]
107870839
Ribosome [BR:
cann03011
]
Ribosomal proteins
Eukaryotes
Large subunit
107870839
Archaea
107870839
Ubiquitin system [BR:
cann04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107870839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L40e
ubiquitin
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
UBL_UBAC1
DUF2604
HATPase_c
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
107870839
NCBI-ProteinID:
XP_016572992
LinkDB
All DBs
Position
6:148005429..148007891
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITIEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtgaaaaccctaacagggaagaccataaccattgaggttgaatccagc
gatgccattgacaatgtcaaggctaagattcaggataaggaaggcatccctccagaccag
cagcgtttgatatttgctggtaagcagcttgaagatggccgtacgctggcagactataat
atccaaaaagagtccactctgcatcttgttctgaggcttcgtggtgggattattgaacca
tctcttatggctttggccaggaagtacaatcaggataaaatgatttgccgcaagtgctat
gcccgcttgcaccctcgtgctgtcaactgcaggaaaaagaagtgtggccatagcaaccag
ttgaggccaaagaagaagatcaagtaa
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