Capsicum annuum (peppers): 107870940
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Entry
107870940 CDS
T04646
Name
(RefSeq) actin-related protein 6 isoform X1
KO
K11662
actin-related protein 6
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107870940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107870940
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cann04812
]
107870940
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
107870940
SWR1 complex
107870940
Cytoskeleton proteins [BR:
cann04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actin-related proteins
107870940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
107870940
NCBI-ProteinID:
XP_016573136
UniProt:
A0A1U8GPF8
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Position
5:173520956..173524291
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AA seq
438 aa
AA seq
DB search
MSNVVVLDNGAGLIKAGIGGERDPTAIVPNSMGRPLSSKKWLMADQLLSPDVDLTSATVR
RPFDRGYLVNPDLQSSLWYHIFSNLLKITPSQSSLLLTEPLFNLPSIQRSLDEIVFEDFN
FKALYVSDSPSLVHLYEASRRPYGLVSKAQSSLVVDCGFSFTHASPVFQNFTLNYAVKRL
DLGGKALSNYLKELVSYRSVNLMDESFLMDDVKEELCFVSLDVPRDLQIARKLGKDNLFR
CMYVLPDGITHTKGFLKDPEEPKRYLSLYDKCPRQVAGEQNDMVQLGNTDHSEDRNRSNG
SRIDLTKNEFGLTNERFLVPEMMFRPADLGLNQAGLAECILQAISSCHPHLHPVLYESII
LTGGSTLFPHFAKRLEMDLRPLVPDKYRLKITTQEDPILGVWRGGSLLASSPDFDAMCVT
KGEYEELGSARCRKRFFH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgttgtagtgttggacaacggagccggtctaattaaagctggtatcggcggt
gaaagagacccaacagctattgtacccaacagcatgggccgtccactttcttcaaagaaa
tggcttatggctgaccagcttctttctcctgacgtcgacctcacttcggccaccgtccgc
cgccctttcgaccgcggttaccttgtaaaccccgatctccaatcttccctttggtatcac
atcttctcaaatcttctgaaaatcactccgtcacagtcctcgctccttctcactgaaccc
cttttcaatctcccttcaatacagcggtcacttgacgaaattgtctttgaagactttaac
tttaaggccctttatgtatccgattccccctctttggtccatctttatgaggcatctcgt
cgcccttatggtcttgtctcaaaagcccagagtagcttagttgtggactgtggattttcg
tttactcatgcttccccagtctttcagaattttacattgaattatgctgtcaaaaggctt
gatcttggtggcaaagctttgagtaattacttgaaagagttggtcagttatagaagtgtt
aacttgatggatgaaagtttccttatggacgatgttaaggaggaactttgctttgtctct
ttggatgttcccagggacttgcagattgctaggaaactgggaaaggacaacttatttagg
tgcatgtatgtgcttcctgatggtattacacatactaagggttttctaaaagaccccgaa
gaaccaaagagatatctgtctttgtacgataaatgtccgcggcaagtagcaggagagcaa
aatgatatggttcagctcgggaacactgaccattccgaggacaggaacagaagcaatgga
tcaagaattgatttaacaaaaaatgaatttggcttgacaaatgagcggttcctcgtccca
gagatgatgtttcgtccagctgacttgggactgaatcaggctggacttgcagagtgcatt
cttcaagctatcagttcctgccatcctcatcttcaccctgttctctatgagagtatcatt
ctgacgggtggcagtactctatttcctcattttgccaaaagactagaaatggaccttcgg
cctcttgtcccagataaatatcgtttaaagattacgactcaagaagatcctattctaggt
gtttggcgtggaggatcactcttggcatcaagtcctgacttcgatgcaatgtgtgtcaca
aaaggtgaatatgaggagctgggatcagcaagatgtcgaaagagattcttccactaa
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