Capsicum annuum (peppers): 107871247
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Entry
107871247 CDS
T04646
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107871247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107871247
03110 Chaperones and folding catalysts [BR:
cann03110
]
107871247
03029 Mitochondrial biogenesis [BR:
cann03029
]
107871247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cann04147
]
107871247
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107871247
Messenger RNA biogenesis [BR:
cann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107871247
Chaperones and folding catalysts [BR:
cann03110
]
Heat shock proteins
HSP60 / Chaperonin
107871247
Mitochondrial biogenesis [BR:
cann03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107871247
Exosome [BR:
cann04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107871247
Exosomal proteins of other body fluids (saliva and urine)
107871247
Exosomal proteins of breast cancer cells
107871247
Exosomal proteins of colorectal cancer cells
107871247
Exosomal proteins of bladder cancer cells
107871247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
107871247
NCBI-ProteinID:
XP_016573615
UniProt:
A0A1U8GR36
LinkDB
All DBs
Position
5:complement(213052911..213061491)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKSRVARSTTQQVGSRLNWSRNYAAKDIKFGVEARGLMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKAVEFKDKIKNVGASLVKQVANATNDAAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIARAMEKVGKEGVITIQDGRTLENDLEVVEGMKLDRGYISPYFITNEK
NQKCELEDPLILIHEKKISSINAIVKVLELALKRQKPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKSNLQDLAALTGGQVITEELGLNIENVELDMLGKCKKVTISKDD
TVILDGAGEKKAIEDRCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEVEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELETLPTANFDQKIGVQIIQNALKM
PVHTIASNAGVEGSVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVIVELPKDEKASPPMPGGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaaacttgcttctaaatccagggttgccagaagcaccacccaa
caggttggtagtaggttgaattggagcagaaactatgcagctaaggatattaaatttgga
gttgaagctcggggattgatgcttcaaggtgttgaacagcttgccgatgctgttaaagtc
accatgggtccaaagggtcgtaatgtggtgattgaacaaagttggggtgcacccaaggtg
acaaaagatggtgtcactgttgcaaaagccgtcgaattcaaggacaaaataaaaaatgtt
ggtgccagccttgtaaaacaggttgccaatgccactaatgatgctgctggtgatggtacc
acttgtgcaacagtcctcacccgagcaatatttactgaagggtgcaagtctgtagctgct
ggtatgaatgcaatggatcttagacgaggtatcacaatggctgttgatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttggtact
atctctgcaaatggagaaagggaaattggtgagctaattgctagggctatggagaaagta
ggcaaggaaggtgtcatcactattcaagatggaaggacactggaaaatgatttggaagtt
gttgaggggatgaagctggacagaggctacatatccccgtacttcatcacaaatgagaag
aaccagaaatgtgagctggaggacccacttattcttattcacgaaaaaaaaatctcaagc
ataaatgcgattgtgaaagtgttagagttggctttgaagagacaaaagcccctcttaatt
gtgtccgaagatgtggagagtgaagcacttgctacacttattctgaacaagcttcgcgct
ggaatcaaggtttgcgccatcaaagctccaggatttggtgaaaacaggaagtctaatttg
caagatcttgcagctttaactggaggccaggtcattacagaagaacttggtttgaacatt
gaaaatgtggagttggacatgctgggaaaatgtaaaaaggtgactatctccaaggatgac
actgttattcttgatggtgcgggtgagaagaaggccatagaggacagatgtgaacagatt
agatcagcaattgaactgagcacatctgattatgacaaggagaaattacaggaaagacta
gctaagctttcagggggtgttgcagttttgaagataggaggagctagtgaagttgaggtt
ggtgagaagaaagacagagttaccgatgctctgaatgccacaaaagctgccgtagaggaa
ggaattgttccaggtggtggagttgcacttctgtatgcatcaaaagaattggagacattg
ccaacagccaactttgaccagaagattggtgtgcaaattattcagaatgctctgaagatg
ccagtacataccattgcctctaatgctggggtggagggatcagtagtggttggcaaactg
ttggagcaggataaccctgatcttggatatgatgcggcaaaaggtgaatatgttgatatg
gtaaaagcaggaatcattgacccattgaaagtaattaggacagccctggttgatgctgct
agtgtgtcatctctattgactacaactgaagctgttattgttgagcttcccaaggatgag
aaggcatctccacctatgcctggtggtggtatggactactaa
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