Capsicum annuum (peppers): 107871348
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Entry
107871348 CDS
T04646
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107871348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107871348
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107871348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRIMA1
zf-C3HC4
NinF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107871348
NCBI-ProteinID:
XP_016573744
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Position
5:219112436..219122272
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLT
LVLETHSLRTTDGSFAESLYGLRRRAVKIKVKGDNKGPDAREEINHTGLEKRQKILSVVF
LVILPYLRSKLHSIYNKEREAALQASLWGHEDERFGDANYFDGDGNPIVSTSGSDTEDSV
RERLRKKIRKIIAACYPWIHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE
LMDSSSRISKIRSRERERLRGPPWLKAVQRALLSCAYGVLDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPTDRTLCPLCSQKRANPSVVSVSGLVFC
YSCVFRYVSQYKRCPVTLMPATVDHIRRLFHDV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggaggacaagggacacgtcccactttcttcgaaatggctgctgca
caacagttgccttctagtctccgagccgcgttaacttattcccttggtgttttagcttta
agaagacctttcatccacaaaattctagattacgaggatgagtgcttcgctttgcttaca
ctagttcttgaaacgcatagcttacgaactacagatgggtcttttgctgagtctttatat
ggtctgcgaagaagggcagttaagataaaagttaagggtgataacaaaggtccagatgcc
agagaagaaattaatcacacaggattggagaagcgccaaaaaattctttcagttgtgttt
ctggttatattgccatatcttagatcgaaattgcattcaatctacaataaagaaagagag
gctgctcttcaagctagtttatgggggcacgaggatgagagatttggtgacgctaactat
tttgatggagatgggaatcctatagtttcaacgagcggttcagatacagaagactcagtt
agagagcgtttgagaaagaaaatcagaaagatcatagctgcttgttacccgtggatacat
gctggaaatgaaggtttatcatttgcttaccagctactgtatttgctggatgctactgga
ttttactctctaggactccatgctctgggtattcatgtttgtcgggctacaggacaggaa
ctgatggattcttcttctaggatttctaaaataagaagccgtgaacgagagagacttcgg
gggcccccttggctaaaggcagtacaaagggctttactaagttgtgcgtatggagttctt
gactatgctcaaactggcctgattgcggcagtgtttttctttaaaatgatggagtggtgg
taccagtcagcagaagaaaggatgtcagctccaactgtttatccacctccacctcctcct
ccgcctccaaaggttgcaaaagagggaattccactacctacagacagaacactgtgtcct
ttgtgctcacaaaagcgtgcaaatccctcagtggtgtcagtttcagggctagtcttctgc
tattcctgtgttttcagatatgtctctcagtataagcgatgccctgtgacgttgatgcct
gcaactgtggatcatatcagaagattatttcatgatgtttaa
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