KEGG   Capsicum annuum (peppers): 107871478
Entry
107871478         CDS       T04646                                 
Name
(RefSeq) ubiquitin isoform X1
  KO
K03873  elongin-B
Organism
cann  Capsicum annuum (peppers)
Pathway
cann04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107871478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cann04121]
    107871478
   03400 DNA repair and recombination proteins [BR:cann03400]
    107871478
Ubiquitin system [BR:cann04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     107871478
   Cul5 complex
     107871478
DNA repair and recombination proteins [BR:cann03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107871478
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBL_UBAC1 Dsc3_N Ubiquitin_2 Pet127 DUF7909
Other DBs
NCBI-GeneID: 107871478
NCBI-ProteinID: XP_016573909
LinkDB
Position
5:220825408..220832688
AA seq 104 aa
MAMYIRVKRNKTTYFIQCDPTETILQIKEKLYNLIDQPANDQRLILMPAGHVLEDSKSLA
DQNVENDAVLALTLRKDDNEFEDVNIVKPNDFYQNRDSEAGANW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcaatgtatatccgtgtgaagcgtaataagaccacctactttattcaatgtgatcca
accgagacaattctacaaataaaggagaaattgtataacctcatagatcaacctgctaat
gatcagcgattaatcctcatgcctgctggacacgtgttggaagactcgaagtccctagct
gatcagaatgttgaaaatgacgctgtgctggcgctgactctgagaaaagatgacaatgaa
ttcgaggatgtaaatatcgtgaaacctaatgacttttaccagaaccgcgattcagaagct
ggtgcaaattggtga

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