Capsicum annuum (peppers): 107871685
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Entry
107871685 CDS
T04646
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107871685
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107871685
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
107871685
NCBI-ProteinID:
XP_047257011
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Position
12:4527586..4534901
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AA seq
612 aa
AA seq
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MKKMGRYKQLNVHLLEVIMVALLFLVADCRLHNGYWDIIWNNTGPQTTRKKILGTSFEVI
IENENQTEISFKRTWNASQSNEPPLKIDKRFIMLRDTPGFYTYTIVERLEGWPHSYIQNL
RIVFKLQQDVFNYISVSDERQRVMPTAEDRENGKVLDYKEAVLLTSPTNSNFKGEVDDKY
FYASDNKDGKVYGWVSNTNPPLGFWMINPSNEYRTGGPLRQDLTTHVGPTVLSVFVSTHY
AGEDLAIKFQHEETWKKVIGPVFVYLNSDPLAKENPSILWNDAKKRMNEEVASWPYEFPV
SKDYIKSNQRGTVRGQLLVHDRFISKKHVPASNAYIGLAPPGQAGSWQRENKGYQFWTKT
DSNGNFVIENVISSTYDLYATVSGFIGDYKYESDVHVTSGGDIQLGNLVYEPPRKGATIW
EIGVPDRTAAEFFIPNPPPQFKVHKYKNNSESKFRQYGLWKQYSVLYPENDLVYNVETGN
YSRDWFYAHVTRKIGNNTYNATTWKIIFDLANVDNSSNYTLQLALAAAHESELQVRVNDE
KAQEPHFTTGYMGGSNAIARHGIHGLYWYHSIGIQGNLIVEGTNTIFLTQIMALTPYQGV
MYDYIRCEGPHQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatggggagatataagcaattaaatgtacatttgttggaggtgattatggtt
gctttgctcttcttagtagctgattgtcgtcttcataatgggtattgggatattatttgg
aataacactggccctcaaacaactcgaaaaaagattttggggacaagttttgaggtaata
attgagaatgaaaatcagacagaaatttcatttaaaagaacatggaatgcttctcaatct
aatgaacctcccttaaaaattgacaaaaggtttataatgctacgcgatacaccgggattt
tatacgtatacgatcgttgaacgtttagaaggatggccacattcatatatacaaaacctc
aggattgtgttcaagcttcaacaagacgtgtttaattacatatctgtttctgatgagagg
caacgtgtcatgccaacagcagaggatcgagaaaatggcaaagtgcttgactataaagaa
gccgttcttcttactagtccgactaattcaaattttaaaggcgaggtggatgacaagtat
ttctatgcaagtgataataaagatggtaaagtttatggatgggttagtaatactaatcct
ccattaggattttggatgattaatccaagcaatgaatatcgtactggagggcctcttaga
caagaccttactacacatgttggtccaactgtacttagtgtatttgtgagtacacattat
gcaggagaggatttagcaattaaatttcaacatgaagaaacgtggaaaaaagttattggg
cctgtttttgtttatctaaattcagatcctttagctaaggaaaatccttccatattgtgg
aatgatgcaaagaaaagaatgaatgaagaagttgcaagttggccttatgaatttccagtt
tcaaaagactacatcaaatctaatcaaagaggaactgttagaggccaactgttagttcat
gacaggtttataagtaaaaaacatgtaccagcatcaaatgcatatatagggttagcccca
ccaggacaagctggatcttggcaaagagaaaataaaggttaccaattttggactaaaaca
gactctaatggaaactttgtcatagaaaatgtcatatccagtacatatgacttgtatgca
acagtttcaggatttatcggggattacaaatacgaatcagatgtacatgtaacgtcaggg
ggtgatattcaattagggaatttggtttatgaacctccaagaaaaggagccacaatttgg
gaaattggtgtgccagatagaactgctgctgaattctttattccaaatccacctccacaa
tttaaagtccacaaatacaaaaataattctgaatcaaaattcagacaatatggtttgtgg
aaacaatatagtgttttataccctgaaaatgatcttgtatacaatgttgagactggcaat
tactcaagagattggttttatgctcatgttactaggaaaataggaaacaatacatataat
gccaccacatggaaaataatatttgaccttgccaatgttgacaattcctcaaattatact
ctccaactggctcttgctgcagctcatgaatctgaactacaagttcgtgtcaacgatgaa
aaagctcaagaaccacattttacgacaggatatatggggggaagtaatgcgatcgcaaga
catggaattcatggattatattggtatcatagcattggaatacaaggcaatttgattgtc
gaaggaacaaacacaatttttcttacacaaataatggctctcactccctatcaaggagtc
atgtatgattatattcgttgtgaaggacctcatcagtaa
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