Capsicum annuum (peppers): 107872356
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Entry
107872356 CDS
T04646
Name
(RefSeq) PHD finger protein MALE STERILITY 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107872356
Transcription factors [BR:
cann03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107872356
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Phenol_monoox
Motif
Other DBs
NCBI-GeneID:
107872356
NCBI-ProteinID:
XP_016574582
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Position
5:complement(25447225..25451345)
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AA seq
668 aa
AA seq
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MVKEMKEMSTLDLSGSKKRKRNINEKVFKFKNFGEQGFPIEFIGCNFEQNVKLLLEFAQQ
ENVSIWSFQLEVHRHPPMHVVLFVVEEQVELSLNPNCKHCQYIGWGNHLMCNKKYHFMLP
TKDTIAACVEGGLKNNIGGENRSKLNLIEIEGHMMHGVFHSNGFGHLLCINGSLEIASSD
LPGHSIMDFWDRLCIGLGARKVSLRDVSTKKGMDLRLLNTVAYGEPWFGRWGYKFGRGSF
GVTQETYQSAINAIQNMPLALLAHHVGVININEILTVLSRYQMLSGHSLVTLCDAIHFML
ELKSRIPKESNLTSCYPGLLVDTTCRWSPKRVEMAIRVVVEALKRAESRWVSRQEVRDAA
RAYIGDTGLLDFVLKSLGNHIVGKYLVRRCLNPVTKVLEYCLEDISKAFPKQDQGFRVND
SKGKQQYKITWVQLMKDIYFLYKNILKEDKGLMSNYTGVLATIPAASRIILDTKYFLKEY
KGIEADSRIEVDKSKIYCAIMLATKDGFGVEEKVMTPFECFTLRKDVTFDELKIEVEKTF
GAIYRGLRNFATRSINNLMSPITGSELVFNVMKPGSKVVLGGVIMSIDHHHNNNNINGGI
FEGIKNNIIVDCLCGTKDEEDGERMVSCDICEVWQHTRCVNIPNHEEIPDIFLCNKCEQD
ILQFQSLP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagatgaaggagatgtcgactttagatctaagcggatcgaaaaaaaggaag
aggaatataaatgagaaggtgtttaagttcaagaattttggtgaacaagggtttcctata
gagtttatagggtgcaattttgagcaaaatgttaagcttcttttggaatttgcacaacaa
gaaaatgttagtatttggtcatttcagctagaagttcatagacatccaccaatgcatgtg
gttctctttgttgttgaagaacaagttgagttgtccctcaatcccaattgcaagcattgt
caatatataggctggggcaaccatctaatgtgcaacaagaagtaccatttcatgttgccc
acaaaggacacaattgcagcttgtgtagagggaggcctaaaaaacaatattggtggagaa
aatagaagtaagttgaatttgatagaaatagagggtcatatgatgcatggtgtgtttcac
tctaatggttttgggcatttgctttgtatcaatggctcattggagattgcttcttctgac
ttgcctggtcactctatcatggacttttgggatcgcctttgcattggacttggtgcaagg
aaagtgagcttaagagatgtctcaacaaagaaaggcatggatctaaggctactcaacaca
gtagcctatggtgagccatggtttgggcgatggggttacaaatttggccgtggaagcttt
ggtgtaactcaagaaacataccaaagtgcaatcaatgccatacaaaacatgccattagcc
ttattggcacatcatgtaggggtcataaatattaatgagatattaacggtgttatcgagg
taccaaatgttatctggtcattcattagtcacactttgtgatgccattcatttcatgttg
gagctcaaatcgaggattccgaaggaaagtaaccttacctcatgttatccggggttattg
gttgacaccacttgtaggtggtcacctaaacgcgttgagatggctattagggttgttgtg
gaagccctaaaaagggccgagtcacgttgggtgtctaggcaagaggttcgtgatgctgct
cgtgcctatattggtgatacagggctcctagatttcgtgcttaagtcattgggaaatcat
attgttggaaagtacttggttcgtcgatgcttaaatccagtgaccaaagttttggaatac
tgtttagaggacatatctaaagcatttcctaaacaagatcaaggttttagggttaatgac
tcaaaagggaaacaacaatacaaaatcacatgggtacaacttatgaaggacatatacttc
ttgtacaagaatattttaaaagaggacaagggattaatgtccaattatacgggcgtctta
gctacaattccagcagcttctagaataatcctagacacgaagtacttcctcaaagaatac
aaagggatagaggcggattcaagaattgaagtagacaaatccaagatttactgcgcgatt
atgttggcaaccaaggatggatttggagtagaagaaaaagtaatgaccccatttgagtgc
ttcacattaagaaaagatgtcacatttgatgagctcaaaattgaagtggaaaaaactttt
ggggctatttatcggggactaaggaactttgctacaagatcaattaacaatttgatgagc
ccgattactggatcagaattggtttttaatgttatgaaaccagggagcaaagttgtccta
ggaggggtgataatgtcaattgatcatcatcataataataacaatattaatggagggata
tttgaaggaattaagaataatattattgtggattgtctttgtgggactaaagatgaagaa
gatggagaaaggatggtttcatgtgatatttgtgaagtttggcagcacactagatgtgtt
aatatcccaaatcatgaagaaattccagacatatttctttgtaataagtgtgagcaagat
attttacaatttcagtcattaccttag
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