Capsicum annuum (peppers): 107872361
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Entry
107872361 CDS
T04646
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107872361
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107872361
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107872361
NCBI-ProteinID:
XP_047257012
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Position
12:4578731..4585760
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AA seq
590 aa
AA seq
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MFSLLLYFNLRQISFENSVSISTRSWDTVWKGTLDRLLASKFSVIAQDVNKVEVSFKKLY
NPKNRGDLPLNVDKRYVVLRGSSGFYSYGIFEHLKGWTYLNMEEARIAFKLNKSLFHFMA
IADDRQRLMPTEEDHANGQKLAYVEAVKLKNPSSPKFEGEVDDKYQYSDEMRNIKVHGWI
SDKPHMGFWVISPSYEYCNGGPLKQDLTSHVGPTSLAIFFSKHYAGPELQVTLRNGEAWT
KVFGPVFFYVNSDSSKDHSILWKDAKRQMNEETKKWPYDFPASPEYLHANQRGSVSGQLL
VHDWYINKNAFPAKSAYIGLANRGDVGSWQTDSKGYQFWTQTDKFGNFKINNVRPGIYGL
YSWVPGVLGEYKYPSNVAIKPDLGKIIFEAIRNGPTLWEIGFPDRSAAEFFIPDPLPGFE
NHLYTNTTDRFRQYGLWDRYNDLYPKGDLIYKVGVSDFRKDWFFAHAIRKNKDNSFSPTT
WQILFNLKNVNNKGTYHLHIALASAAYAHLQVWINTPSKPRPWFDSSKIGNSNAIARHGI
HGLYTLFNIEFPGTQLHVGENIIYLKQASIDTPFNGFMYDYIRLEGPSRR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttacttctgtattttaacttgagacaaatatctttcgaaaatagcgtctct
atctctacgaggtcttgggatactgtgtggaaaggtacattggacaggctattagcatca
aaatttagtgtgatagcacaagatgttaacaaagttgaagtttctttcaaaaaattatat
aatcctaaaaatcgtggtgatcttcctctaaatgttgacaaaaggtatgtggtgctacgt
gggagttcaggattttattcatatggaatatttgaacatttaaaaggatggacatatcta
aatatggaggaagctagaattgcatttaagctcaataaatcattgtttcattttatggca
atagctgatgataggcaaaggttaatgccaacagaagaggatcatgcaaatggccaaaaa
cttgcttatgtagaagctgttaaacttaaaaatccatccagccctaaattcgaaggagag
gttgatgacaagtaccaatattcagatgaaatgagaaatattaaagtacatggttggata
agtgataaaccacacatggggttttgggtaatttcaccaagttatgaatattgcaatggt
ggacctttgaagcaagatcttacatctcatgttggtccaacatcattggctatatttttc
agtaaacattatgcagggccagaattacaagttacattaagaaatggagaggcatggact
aaggtttttggacctgtatttttctatgttaattcagattctagcaaagatcatagcata
ctttggaaagatgctaaaagacagatgaatgaagaaacgaaaaaatggccctatgatttt
cctgcatcaccagaatatcttcatgcaaatcaacgtggctcagttagtggtcaattattg
gttcatgattggtacataaacaaaaatgcttttcccgcaaaaagtgcatatattggactt
gccaaccgtggagatgttggctcttggcaaactgatagcaagggttatcaattttggact
caaactgataaatttggtaatttcaagataaataatgttagacctggaatttatggatta
tattcttgggttcctggagttctgggagaatacaaatacccttctaatgtggcgatcaaa
ccagatttgggtaaaattatttttgaagcaataagaaatggtccaactttatgggaaatt
ggatttccagatagaagtgctgctgaattttttatacctgatccattgcctggttttgaa
aatcatttgtacactaacactactgacagatttagacaatatggtttatgggatcgttac
aatgatttatatcctaaaggagacttaatatacaaagttggtgtcagtgattttcgaaaa
gattggttctttgcccatgcaatcaggaaaaataaggacaacagtttttcaccaacaaca
tggcaaattttatttaatcttaaaaatgtgaataataagggaacttatcatcttcatata
gctttggcttctgcagcttatgcccatttacaggtgtggataaatactccatcaaaacca
aggccatggtttgattcatcaaaaattgggaatagtaatgcaatagcaagacatggaatt
catggattatatacacttttcaatattgaatttccagggacacaacttcatgttggtgaa
aatataatttatttgaagcaagcatcaattgatacccctttcaatggattcatgtatgat
tatattcgtctcgaaggtccttcacgacgatag
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