Capsicum annuum (peppers): 107872362
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Entry
107872362 CDS
T04646
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X2
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107872362
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107872362
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107872362
NCBI-ProteinID:
XP_016574587
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Position
12:complement(4545100..4554376)
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AA seq
662 aa
AA seq
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MGKNIQLWLYVMELITMVAFIFLLIADGRRLTETPIVQLDIQTEQATMSNGIANVTLSIP
DGLITSISYCGINNLLATQNVEKDRGYWDVFWNHTTSRRARKKFLENSFEIIMDNENQAE
ISFKSTWNTSQSDELPLNSDIRFVMLRDTPGFYTYAIFERLEGWPLVDIENLRVVFKLQH
DMFHYMAISDERQRIMPMPVDRETGKVLDYKEAVLLTNPTNTDLTGEVDDKYFYANDNKD
DRVHGWVGADPPVGFWMIIPSDEFRTGGPYKQDLTTHVGPTVLSVFVSRHYAGDDLVIKF
QQGEPWKKVIGPVFLYLNSNASAMDDPTVLWDDAKKRMNQEVASWPYDFPVSEDYIKSNQ
RGTVTGQLFVNDSTTTLVPASNSYIGLAPPGDVGSWQRENKGYQFWTKADACGNFAIENV
IPGTYNLYATVPGTIGDYIYTSDVEVTPGCTIEIGSLVYNPPRNGATLWEIGVPDRTAAE
FFIPTPPTQFNAHVYQNNSESIFRQYGLWEQYSVLYPENDLVYNVGTSNYSKDWFFAHVT
RNIGNKTYEATTWKIIFNLECVVDSAANYTLQLALAAAQGAKLQVRFNDEKVVDPHFTTG
KIGGDNAIARHGIHGLYWLHNIIVCGNLLLNGTNTIFLTQAIATNPFQGVMYDYIRFEGP
HQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaatattcaactatggttatatgtcatggaattaattactatggttgctttt
atattcctgttaatagctgatggacgaagattgacagaaacgccaatcgtccaattggat
atacaaactgaacaagcgacaatgagcaatggcattgcaaatgttactttatctatacca
gacggtctcattacgagcatatcatattgtggaatcaacaacttactcgcgacccaaaat
gtcgaaaaagatagagggtattgggatgttttttggaatcatacaacatctcgaagagct
cgaaaaaagtttttggaaaatagtttcgagatcataatggacaacgaaaaccaggcagaa
atttcatttaaaagtacatggaatacttcccaatctgatgaacttccattgaacagcgat
ataaggtttgtgatgctacgagacacacctggattttatacgtatgctatatttgaacgt
ctggaaggatggccccttgtagatatcgaaaatctaagagttgtcttcaagcttcaacac
gacatgtttcattacatggctatctcggacgagaggcagaggatcatgccaatgccggtg
gaccgagagacaggcaaggtgcttgactacaaagaagctgttcttttaacaaatccaact
aatacagatctaacaggagaggtggatgacaaatacttctatgcaaatgataacaaagat
gatagagttcatggatgggtaggtgctgatcctcctgtaggattttggatgataattccg
agtgatgaatttcgtactggaggaccttacaaacaagatctcactacacatgttggtcca
actgtactttctgtatttgtaagtagacattatgctggtgacgatcttgtgatcaaattt
caacaaggagagccatggaaaaaagttattggccctgtatttctatatctcaactcaaat
gcttctgctatggacgatcccacggtactctgggacgatgcaaagaaaaggatgaatcaa
gaagttgcaagctggccctatgattttccagtttcagaagactacatcaaatctaatcaa
agaggaactgttaccggccaactttttgttaatgacagcactactactttagtaccagca
tccaacagttatatagggttagcaccaccaggagatgttggatcttggcaaagagaaaac
aaaggatatcaattttggacaaaagcagatgcttgtgggaatttcgccatagaaaatgtc
atacccggtacatataacttgtatgcaaccgtccctggaactattggcgattacatatac
acttctgatgtagaagtaactccaggttgtactattgaaatagggagtttggtttataat
cctccaagaaatggagcaacactttgggaaatcggtgtaccagatcgcactgctgctgag
ttcttcattccaactccacctacacagtttaacgctcatgtataccaaaacaattctgaa
tcaatatttagacaatatggtttgtgggaacaatatagtgttttgtatcctgaaaatgat
ctcgtctacaatgttggcactagcaattattcaaaagactggttttttgctcatgttact
aggaacatagggaacaagacctatgaagctaccacatggaaaatcatatttaacctcgaa
tgtgttgtagatagcgcggctaattacactctccaattggctctcgcagcagctcagggc
gctaaactacaagttcgtttcaacgatgaaaaagttgtagatcctcattttacaacaggg
aaaataggtggagataatgcaattgcaagacatggtattcatggattatattggcttcac
aacattatagtatgtggcaatttactcttaaatggaacaaacacaatatttcttacacaa
gcaatagctactaacccttttcaaggtgtaatgtatgattatattcgttttgaaggaccc
catcaatga
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