Capsicum annuum (peppers): 107872561
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Entry
107872561 CDS
T04646
Name
(RefSeq) rhamnogalacturonate lyase isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107872561
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107872561
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
107872561
NCBI-ProteinID:
XP_047269236
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Position
5:179367990..179381051
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AA seq
686 aa
AA seq
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MNKIGWKRQRRHVLWFCVIVFQLFLLVSGSRTDDFSPNCRHTPLSISQKLASTTPPVKLL
ISRNYVVMDNGIVKVTLTNPTGSVAGVSYNGIDNVLETNFKDTNRGYWDTVWERPGDKDH
TFDMLLGTKFRVIAQDKNKVEVSFTKTWNPSINGTANDLPLNIDKRFVMLRGSSGFYSYG
IFEHLKDWPSLILEEARIAIKLRRTLFHYMAISDDMQRMMPTDEDRSDGQVLDYKEAVRL
THPSNPKLKGEVDDKYQYSFENKDIKVHGWVCNTPHVGFWVITPSYEDRNGGPTKLDLTS
HAGPTSLAVFFSGHYAGPELGVAIKNGESWKKVFGPVFFYLNSDSGDNHPTLWEDAKRQM
QEETAKWPYDFPESVDYPHANQRGTVRGQLFVRDRYINNNPVYAKSAYIGLALPGDVGSW
QYETKGYQFWIQTDETGHFSITDVRPGTYNLYSWVPGIIGDYKYNYDINVKQGSDINLGH
LIYDPPRNGPTLWEIGIPDRTAAEFFVPDPLPGLTNQLFNNTTQKFRQYGLWDRYTDLYP
YKDLVYKVGASDYRKDWFFAHVTRRTRSRNYIPTTWQISFKLPSVDPKGTYTLRIALASA
TYSHLQGRINNPSRPMPHFETPSTGRSNAIARHGIHGLYWLFNFQIQGLQLQKGENTIFL
KQIKGGNPFYGHQYDYIRLEGPPQQN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaataagattgggtggaagaggcaacggcgtcatgttttatggttctgtgtaattgtt
tttcagcttttcttacttgttagtggttcaaggacggacgattttagtccaaattgcagg
catactccactaagcattagtcaaaagttggcatcaactactcctcctgtcaaactgctt
atctcacgtaattatgtagttatggataatggcattgtcaaagttaccctaactaatccc
actggatccgttgctggggtaagttacaatggtattgataatgtactagagacaaacttc
aaagatacaaacagaggatattgggataccgtgtgggaacgccctggagacaaggatcac
acgtttgacatgcttttaggaacaaaattcagggtcattgcacaagacaaaaacaaagtg
gaagtttcttttacaaaaacatggaatccttcaattaatggtactgccaatgatcttcct
ctaaacattgacaaaaggtttgtaatgttgagggggagttctggattttattcatatggg
atatttgaacacttgaaggactggcccagcctaattcttgaagaagccaggattgccatt
aagctcagaagaactctgttccattatatggcaatatcagatgatatgcaaagaatgatg
ccaacagatgaagatcgatccgatgggcaagttcttgactacaaagaagctgttagactt
acacatccatccaatccaaaacttaaaggagaggtggatgacaagtaccaatattcattt
gagaacaaggatataaaggtacatggatgggtttgcaataccccacacgtaggattttgg
gtgataacacctagttatgaagatcgtaatggtggacccaccaaactagatctcacttct
catgctggtcccacctccttagcggtattttttagtgggcattatgcaggaccagagttg
ggagtagcaattaaaaatggagaatcatggaagaaggtttttgggcctgtctttttctat
cttaactctgattccggtgacaatcaccctacactttgggaagatgctaaaagacagatg
caagaagaaactgcaaagtggccgtatgattttccagaatctgttgattatccccatgct
aatcaacggggtacagttagaggtcaattattcgtacgagataggtatataaacaataat
cctgtttatgcaaaatctgcatatattggactagcactccctggagatgttgggtcatgg
caatatgagaccaaaggttatcaattttggattcaaacagatgagactggacactttagt
attactgatgttagacctggaacttataacttgtattcttgggtccccggaattattgga
gattacaaatacaattatgacatcaatgtcaaacaaggaagtgatataaacttaggtcac
ctaatttatgatcctccaagaaatggtccaactttatgggaaattggcattcctgatagg
actgctgcagaattttttgtacctgatccattgcctggactcacaaatcaattattcaac
aatactacacaaaaatttagacaatacggtttgtgggatcgatatactgatttatatcct
tataaagatttggtttataaagttggtgctagtgattatcgaaaagattggttctttgct
catgtaaccaggagaactagaagcaggaattatataccaacaacgtggcaaatttcattt
aaactcccaagtgttgatccaaagggaacttatacactacgtatagcactggcttctgca
acctattcccatttgcaggggagaatcaacaacccatctagaccaatgcctcactttgaa
actccatcaactgggagaagtaatgcaatagctagacatgggatacatggattatattgg
ctcttcaattttcaaattcaagggttacaattacaaaagggagaaaatacaatatttttg
aagcaaattaaaggtggtaatcctttctatgggcatcaatatgactatattcgtttggaa
ggccctccacaacaaaactaa
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