Capsicum annuum (peppers): 107872766
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Entry
107872766 CDS
T04646
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107872766
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107872766
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
107872766
NCBI-ProteinID:
XP_016574852
UniProt:
A0A1U8GUC5
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Position
1:41847844..41854022
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AA seq
603 aa
AA seq
DB search
MGVAGNFWDLLKPYARSEGFDFLRNKRVAVDLSYWIVQQETALKGQIRNPHIRLIFFRTI
NLLSKFGAFPVFVSDGTASPLKSQARIARFFRTSGIDLSSLPVAKDGISIERNKEFQKCE
KECVELLELLGVPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGANCVIKNMQPNS
NEPFECYHMLDIESGLGLRRNQLIAISLLVGNDHNLTGVPGIGLETACRFVKSFSDDEIL
YRLQEIGGGDLQAFQPDFNLDSSSIPSSDESPRKTKVPHCSVCGHPGSKKAHLKFACHYC
SSTTNEGCIQKPLGFKCNCSPCDMNNKEKEQKRNENWKLKVCRKIASEQNFPNNEITEMY
LNKQQQYDGDYHLSWGNPKTDMIVDYLAYYQHWEPSYTRQRMFPMLSTIFLRDVASNSKD
QLLGGQYEFDSIQRVKTKFGHQVYVINWKKPSREKSNVICMPSEDSDTEQEPVIADESTD
LLDEPGALQIHDKDECSFLSTEEDMVLVQNAFPEKVSQFLRDKELKESKSRRKRPMKSAN
SESPRGVQLSITNFYRSSKVPSHEAPGEKEAGCSKISADTSVERDKEPIRNYSKSVRRKL
LFD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgctggaaatttctgggatttactgaaaccctacgctcgatcagaaggtttt
gatttcttgagaaataagcgtgttgctgtagacttatcatattggatcgttcagcaagaa
actgcactcaaaggccaaattcgaaatccacatatacgactcatcttcttccgtaccatc
aatcttttatctaagtttggagcatttcctgttttcgtctcggatggtactgcatcacca
cttaagtctcaggcaaggattgcacgattttttcggacatcaggaattgatttatcaagt
ttgccagtggctaaggatggcatttcaattgaaaggaacaaggaatttcagaaatgcgag
aaagaatgtgttgagttgcttgaacttcttggagtaccagtcctaaaagcaaaaggagaa
gctgaagcactctgtgcgcagttgaatagagaaggactagttgatgcttgtattacttct
gacagtgatgcatttctctttggagccaattgtgttatcaaaaacatgcaacccaactcc
aatgaaccatttgagtgctatcacatgttggatattgaatctggtcttgggctgaggagg
aatcagttgatagcaatttcgcttttggtgggaaatgaccacaacttaactggtgtcccc
gggatcgggcttgaaacggcatgtcgttttgtcaaatcttttagtgatgatgagatcttg
tataggttgcaggaaataggtggaggagatctacaagcgtttcagcctgacttcaactta
gacagtagttctatacccagttcagatgagagccctcggaagaccaaagtgccacattgt
tcagtctgtgggcatcccggcagcaagaaagctcacctcaagttcgcttgtcactactgc
agttccaccaccaatgagggttgcattcagaagccattgggcttcaagtgtaattgctcc
ccatgtgatatgaataataaagaaaaagagcagaaaagaaatgagaattggaagcttaaa
gtttgcagaaagatagcctcggagcagaattttccaaacaatgagatcacagaaatgtac
ttgaacaagcaacagcaatatgatggtgattatcatttgtcatggggaaatccaaagact
gatatgatagttgattatctggcttattatcagcactgggagccatcttatacacgtcaa
cgaatgtttcctatgttatccaccatatttctaagagatgtggcgtcaaattccaaagat
caattgttagggggacaatatgaatttgactccattcagcgagtgaagacgaaatttgga
catcaagtttacgtaatcaattggaagaaaccatcacgtgaaaagagcaatgtaatctgc
atgccttctgaagactctgatacagagcaggagccggtaatagctgatgagtccacagat
ttacttgatgaacctggtgcgctgcagattcatgacaaggatgaatgcagctttttgtca
actgaagaagatatggtgcttgtacagaatgctttcccggaaaaggtgtcccagttcttg
agagacaaggaactaaaagaatcaaaatcacgtagaaaaagaccaatgaagtctgcaaat
tcagaatcaccaagaggtgttcaactcagcatcactaacttctatcgatcatccaaggtc
cctagtcatgaggcaccaggggagaaagaagctggatgttcaaagatcagtgcggatact
tctgtagagagagataaggaacccattcggaactactccaagtcagttagacgcaagctt
ttgttcgattag
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