Capsicum annuum (peppers): 107872794
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Entry
107872794 CDS
T04646
Name
(RefSeq) RNA-binding protein Y14A
KO
K12876
RNA-binding protein 8A
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
cann03015
mRNA surveillance pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107872794
09122 Translation
03013 Nucleocytoplasmic transport
107872794
03015 mRNA surveillance pathway
107872794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107872794
03041 Spliceosome [BR:
cann03041
]
107872794
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107872794
Spliceosome [BR:
cann03041
]
Complex C
Other components
EJC/TREX
107872794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
107872794
NCBI-ProteinID:
XP_016574886
LinkDB
All DBs
Position
6:191779466..191785651
Genome browser
AA seq
195 aa
AA seq
DB search
MANVEEAVDFEPEEDDLMDEDVEGSSPRAPIPKLKSAITTAGGGGSSGSKKIKGRGFREE
TAEAERNARLSARFDSLMTEGGPGPERSIEGWIILVTGVNEEAQEDHLHDTFGEFGEIKN
LHLNLDRRSGFVKGYALIEYENFEEAERAINEMDGNELLTQTIHVDWAFSKGPFRRRNAG
RRSSHRSRSPNRRRF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagaggaagctgtagattttgagccagaggaagatgatctaatggacgaa
gacgttgaaggttcatcacctagggcaccaattccaaagctcaaatcagccattactact
gccggcggcggcggttcttctggttctaagaaaatcaaagggcgtggtttccgtgaagag
actgctgaagctgaacgtaatgctcgcctttctgccagatttgattctctcatgaccgaa
ggtggacctggacctgaacgatccattgaaggatggattattttagtcactggagttaat
gaggaggcacaagaagatcatcttcatgatacatttggtgagttcggggagatcaagaat
ttacatttgaatctggaccgtcgttctggatttgtcaagggttatgcgcttattgaatat
gaaaactttgaagaagcagaaagagctatcaatgaaatggatgggaatgagctgctcact
cagactatacatgtggactgggcattcagcaaaggtccttttagaaggagaaatgctggg
aggaggtcaagtcatcgttctagaagtcctaacaggaggcgattctaa
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