Capsicum annuum (peppers): 107872815
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Entry
107872815 CDS
T04646
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107872815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107872815
Spliceosome [BR:
cann03041
]
Common components
Common spliceosomal components
SR proteins
107872815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
RNA_bind
Motif
Other DBs
NCBI-GeneID:
107872815
NCBI-ProteinID:
XP_016574956
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All DBs
Position
1:41910210..41923550
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AA seq
281 aa
AA seq
DB search
MILPSYNLLRPLPFAFLMTLLSPRYPTCFNIDSMTTSDPVAAVEFLRTDFSFPFPPSPSF
VGVLGGYAFVYMEDERDADDAIRRLDRIEFGKKGRRLRVEWTKQDRGSRRPEISRKPAAN
TRPSKTLFIINFDPVHTQTRDIERYFEPYGRILNVRIRRNFAFVRYESEDDASRALQATN
MSKFMDRVISVEFATRDDDDRRKRHSPDRRGRDMSPDRRGYDRRRSPSPYRRDRGSPDYG
HGARLISRLQTRRSPEYGRAESSVNERHHSRSPPRRERSRP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgattctaccatcatacaatttactgagaccattgccttttgctttcctcatgaccttg
ctcagtcctcgatatccgacatgtttcaacatagatagcatgaccacctctgatccagtt
gctgctgttgagttccttcgtacagatttttctttcccctttcccccttccccctcattt
gtgggggttttgggtggatatgcttttgtttatatggaggacgagcgagatgctgatgat
gcaattagaagacttgataggatagagtttggtaaaaagggacgcaggcttcgtgtagaa
tggaccaagcaggatcgtggtagtaggaggcctgaaatttccagaaaacctgctgcgaat
actagaccttcaaagactttatttataatcaattttgatccggttcatactcagacaagg
gacatagagaggtattttgaaccatatggtagaatattaaatgttcgaatccgaaggaat
ttcgcgtttgttcggtatgagtcagaggatgatgctagcagagcattacaagcaacaaac
atgagcaagttcatggatcgagttatttctgtagaatttgcaactcgagacgatgatgac
aggagaaaacgtcacagtcctgacagaagaggtcgtgacatgtcacctgaccgaagaggt
tatgaccgtcggcgttcacctagcccatatagaagggataggggtagtcccgactatggg
catggagcacggctaatctcaaggcttcagaccaggagaagtcctgagtatggccgagca
gaaagctccgtcaatgagagacatcacagtcgttcaccaccgcgacgcgagaggtctcga
ccttga
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