Capsicum annuum (peppers): 107873094
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Entry
107873094 CDS
T04646
Name
(RefSeq) transducin beta-like protein 2
KO
K23325
transducin beta-like protein 2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cann03012
]
107873094
Translation factors [BR:
cann03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107873094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Ge1_WD40
Beta-prop_WDR41
DUF6556
NBCH_WD40
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
DUF4834
DUF2681
Peptidase_S49_N
FemAB
Vpu
SLATT_5
MAP17
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
107873094
NCBI-ProteinID:
XP_016575309
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Position
1:complement(43226598..43240676)
Genome browser
AA seq
441 aa
AA seq
DB search
MDSTIPIAIVSAIIGIVIAFLVFSNYFQNRKSEVESITNQLETIQTNQKTSKPQQSHKNT
SKKSQAKSHSHTADHKDANKRHHPLDLNTLKGHGDIVTGVCFLSNAESLATACADGVVRV
FKLDDASSKSFKFMRINLPAGGHPIAVAAADEAAVAVACHALFGSSLYMYGEEKPKTGAD
SKQAKLPLPEIKWEQHKVHDKRAILTLVGTKATYGSADGSTIIVSCSEGTDIVLFHGKSG
KIVGNVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEVVYSKDGAVKEVSRIMELKGHK
SAVTWLCFSPNSEQVITASKDGTIRVWNINVRYHLSEDPKTLKVFPIPLKDANGTTLHYD
RLCISPDGKILATTHGSMIQWLCPETGKVLDTAEKAHDGDITDMAWSPSPIPMGDKRILV
LATASVDKKVKLWAAPSLNAS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacgatcccgattgcgattgtatcggcgattatcggaattgttatcgctttt
ctagttttcagcaactatttccaaaacaggaaatcggaagttgaatctatcaccaatcag
ctggagacaattcaaaccaatcagaaaacttcaaagcctcagcagtctcacaaaaacact
tccaagaaatcgcaagctaaatctcattctcataccgccgatcataaggatgcaaacaaa
aggcatcacccacttgacttgaacactctaaaaggtcatggagatattgttacaggagtt
tgcttcttatcaaatgcagagtctttggcaactgcttgtgctgacggggttgttcgggtc
ttcaagttggatgatgcttcaagcaaaagctttaagtttatgagaattaatttgcctgct
ggaggtcatccaattgcagttgcagctgctgatgaagctgcagttgcagtggcatgccat
gctctttttggttcttccctctatatgtatggtgaagagaaacctaaaacaggcgctgat
tccaaacaggccaagcttccacttccagaaatcaaatgggaacagcacaaagttcatgac
aagagagcaatcctaactctagttggtaccaaggcaacttatggcagtgctgatgggagc
acaatcattgtttcatgttctgaaggtactgatattgtgctttttcatggaaaaagtggc
aagattgttgggaacgtcgatactaatcaactcaaaaacaacatggctactatatctccc
aatgggcgttttatagctgctgcagcttttactgctgatgtcaaggtttgggaggttgtg
tactcgaaggatggtgctgtaaaggaggtttcaagaattatggagctcaaggggcataag
agtgcagtgacgtggctatgctttagcccgaattctgagcaagtaatcactgcatcaaag
gatggtaccatcagagtgtggaatattaatgtgcgctatcatctctctgaggaccctaag
acattaaaggtgttccctattccccttaaggatgcgaatggcacaactttacactatgat
cgtttgtgcatatcacctgatggaaagatattggccactactcatgggtcaatgatccaa
tggctatgtccggagactgggaaggttttggacacagctgaaaaagcacatgatggtgat
atcactgacatggcatggtcgccttctccgattccaatgggtgacaagcgaattctggtg
ttggctacagccagtgtggataagaaagtgaagttgtgggcagctccatccctgaatgca
tcatga
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