Capsicum annuum (peppers): 107873172
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Entry
107873172 CDS
T04646
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107873172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107873172
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107873172
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
107873172
NCBI-ProteinID:
XP_016575408
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All DBs
Position
1:43165064..43171265
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AA seq
710 aa
AA seq
DB search
MARNKEALVLVLDVGPSMHSVLPEIEKVCSLMIQKKLVFSRYDEVGFVLFGSADTKNELT
EEVGGYEHVTVLRNIKVVDEDLVDALQSLPRGSVPGDFLDAIVVGMDMLIKKFGQTNKGK
KRLCLITNAVSPIKDPFEGTKEDQVNTIATQMAAQSMKMDCIIVRMKQDWETNRRVMEEN
DFLMSVFSNKSSSKVVYVESPTSLLGALRTRNILPVTIYRGDFEISAQLKIKVWVYKKTS
EEKFPILKKYSDKAHPTDKFATHEIKVDYEYQSIEDPNKVVPPDQRIKGFQYGPQVVPIS
SAELEAVKFKPEKSVKLLGFTDATNIMRHYYLKDVNSFIGEPGNKKAILALSALARTMKE
MNKVAIVRCVWRQGQGNVVVGALTPNVSDKDNTPDSFYFNVLPFAEDVREFQFPSFSNLP
SSMQPNEKQQEAADKLVQMLDLAPPGKQEVLPPDFTPNPVLERYYRYLDLKSKHPDAAVP
PLDETLRKITEPDVELLFRNKSIIEEFRRSFELKDNPKMKKSARRMKERPSGSDEEREEF
DKDADAKAIDSMEYSSKTKVEKVGDVNPVEDFEEMLSRRDDPKWINKAIHDMKNRIFDLV
ENSYEGDTFHKALECLVVLRKGCILEQEPKQFNDFLCHLSKFCQEKDLRSFCQYLTSNDI
TLITKAEAPDSEIPEHEARSFMVKPELDSQNMKPEAKVENDIMSIYLGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaataaggaagcgcttgtattggtgcttgatgttggtccttctatgcactca
gttttgcccgagattgaaaaagtttgctcattaatgatacagaaaaagctggttttcagc
agatatgatgaagtggggtttgtcttatttggatctgcggataccaagaacgaattgaca
gaggaagtaggtgggtatgagcacgtgacagttctgcgaaatatcaaggttgtagatgaa
gatcttgttgatgctctgcaaagccttccacgaggaagcgttcccggagattttcttgat
gcgattgttgttggaatggacatgctgattaaaaagttcggacaaaccaacaagggaaag
aaacgcctttgccttattacaaatgctgtttctcccatcaaagatccatttgaaggaaca
aaggaagatcaagtaaacaccattgctactcagatggcagcacaaagcatgaagatggac
tgtataattgttagaatgaaacaagattgggaaacaaacaggagagttatggaagaaaat
gattttctaatgtccgtattctcgaataaatcttcctcaaaagtagtatatgtggaaagt
ccaacttctttgttaggtgcacttagaactcgtaatatattgccagtcacgatatacaga
ggtgattttgaaatcagcgcacaattgaagatcaaggtatgggtttacaagaaaacatct
gaagagaagtttcccatcttgaaaaagtactctgataaggctcatcccactgataaattt
gccactcatgaaatcaaggttgattacgaatatcaaagcatagaagaccctaataaagtt
gtgccaccagaccagagaattaaaggttttcagtatggacctcaagttgttcctatatca
tctgctgagttggaggctgtaaagttcaaaccagagaaaagtgtgaagcttctaggattc
acagatgctacaaatataatgcggcattactacctgaaagatgtaaatagcttcataggc
gaacctggcaacaaaaaagccatccttgcactttctgctttggcaaggacaatgaaggaa
atgaacaaagtagcaattgtccgatgtgtatggaggcaaggacagggtaatgttgttgtt
ggggccctaactccaaatgtctctgacaaggataatactcctgattcattttacttcaat
gttcttccctttgctgaggatgttcgggagtttcagtttccttctttcagcaatctgcct
tcatcaatgcagccaaatgaaaagcaacaagaggcggcagataaattggttcagatgttg
gatcttgcaccacctggaaaacaggaagtgttgcctcctgactttacacctaatcctgtt
ttagagcgttactaccgctatcttgacctgaagtcaaagcacccagatgctgctgttcct
ccacttgatgaaaccctcagaaagatcacggaacctgatgttgagcttctttttcgaaac
aagtccatcatagaggaattccgtaggtcttttgaactaaaagataatccaaagatgaaa
aaatctgcaagaagaatgaaagagagaccttcaggatcagatgaggaaagagaagagttt
gacaaagatgctgatgccaaagctattgattccatggaatactcatccaaaacaaaggtt
gagaaagttggagacgttaatcctgttgaagactttgaggagatgttgtctcgaagagat
gatccaaaatggattaataaggccattcatgacatgaaaaataggatctttgatctcgtg
gagaattcttatgaaggagatacatttcataaagcattggaatgtttggtggtgctgcgc
aaaggttgcatccttgagcaggaaccaaagcagttcaatgatttcttgtgccacctgagt
aaattctgtcaagaaaaagacctgagaagtttttgtcaatatctcacatctaacgacatc
actttgataacgaaggcagaagctccagacagtgaaattccagagcatgaggctagaagc
tttatggtcaagcctgaacttgactcgcaaaatatgaaaccagaggctaaagttgagaat
gatattatgagtatatacctgggtgggaagtag
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