Capsicum annuum (peppers): 107873213
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Entry
107873213 CDS
T04646
Name
(RefSeq) autophagy-related protein 18d isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107873213
Membrane trafficking [BR:
cann04131
]
Autophagy
Other autophagy associated proteins
Others
107873213
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Vps41
CFAP251_N
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
107873213
NCBI-ProteinID:
XP_047270811
LinkDB
All DBs
Position
6:119772775..119779660
Genome browser
AA seq
500 aa
AA seq
DB search
MPEVRSMHPKSEFLKLQTKKRRMHRKSHVSYYLFHVGRTVLKLKEKGSHSFCLHLVMTTL
SSPNSSTVSPSRGTISPAAFGTYESPMLGASHSGHSEPEISDSDETELHSVSWNQDYSCF
AAGTSRGFRVYNCDPFKETFRRDLKSGGFRIVEMLFRCNILALVGAKANTQYPPNKVIIW
DDHQSRCIGEFSFRSEVHAVKLRRDCIVVILEHKIYVYNLMDLKLLHQIETVANPRGLCC
LSHHLNTSVLACPGLRKGQIRVEHFGLNMTKLIKAHDSQVACLTLTIDGLLLATASTRGT
LIRLFNTMDGTQLQEVRRGVDRADICSIALSPNVQWLVVSSDKGTIHVYSLRVRVVGEDA
AADAAVRTPTLLGQTSSASLDALISPSTGANPGSSFSFMKGVLPKYFSSEWSFAQFRLPE
CTQYIAAFGSQNTIITAGTDGRYLSLFWLSMSLYCNVGQQIQFNLLTSVLLTLWVETGFE
NSPTPYTPKRNLALVQVFWH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagtaaggtcgatgcatccaaaaagtgaattcttgaaattgcagacgaaaaaa
cgaagaatgcatagaaagtctcatgtttcatattatcttttccatgtgggtcgaactgtt
ttaaagttaaaagaaaaaggttcccatagcttctgtttgcatttggttatgactactcta
tcatcgccaaatagttcaactgtttcaccttctcgaggaacgatttcgccagcagccttt
gggacatatgaatctcccatgcttggggcctctcattctggccattctgaaccggagatc
agtgacagtgatgaaacggagctacactctgtatcgtggaatcaggattatagttgcttt
gctgctggcacaagtcgtggctttcgtgtgtataactgtgaccctttcaaagagactttc
agacgtgatctgaaaagtggtggatttagaattgtggagatgctgttccgatgcaatatt
ttagcacttgtgggtgctaaagccaatacccagtaccctcctaataaagttattatatgg
gatgaccatcagagccggtgcataggtgaattttcatttaggtctgaggttcatgcagtg
aaactaagacgggattgtattgttgtaattcttgagcacaagatatatgtctacaatttg
atggatctgaagcttcttcatcagatagagactgtggccaatcctaggggactttgctgc
ctctcacaccatttaaatacatctgtattggcttgcccaggccttcgaaaaggacaaatc
cgagttgagcattttggcctgaatatgacaaagttaatcaaggcacatgattctcaagta
gcatgcttaaccttgactattgatgggctgcttcttgcaacagcaagcactcgaggaact
ttgataagactcttcaacaccatggatgggactcagttgcaagaggtgcgtagaggggtc
gacagagcggatatctgtagtatcgctctatcaccaaatgttcagtggttggtcgtctcg
agcgacaaaggtaccatccatgtatacagcctgagagtacgtgttgttggggaggatgct
gcagctgatgctgctgttagaactccaacattgttaggtcaaacttcatcagcttctctt
gatgcacttatttctccaagtactggagccaaccctggttcatcgttttctttcatgaaa
ggagttttgccaaaatactttagctctgaatggtcatttgctcaatttcgcttgccagaa
tgtacccagtacattgctgcttttggttctcagaacacaattattactgctggcactgat
ggaaggtacctatcactcttctggctcagtatgtcactctattgcaatgtcggtcagcaa
attcaatttaaccttttaacatctgttcttttgacgctttgggtggagacgggatttgaa
aactcccccaccccctacacaccaaaaagaaacttagcattagtgcaagtattctggcat
tag
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