Capsicum annuum (peppers): 107873249
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Entry
107873249 CDS
T04646
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cann03021
]
107873249
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107873249
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
TEX13
Rx_N
Motif
Other DBs
NCBI-GeneID:
107873249
NCBI-ProteinID:
XP_016575501
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All DBs
Position
12:63877491..63884631
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AA seq
525 aa
AA seq
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MNSVLNEQILADKLSKLNGSQQCIETLSHWCIFHQDKAEMVVTSWSKQFHSSEMAQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPSALKEIVGKDDALGNKVVSRLVNIWEERRVFGS
RAQNLKDIMLGEELPPPLEFGRKRSRSVRIVKRDTRSIKTKLTVGGTAEKIVSAFHLVVS
ERTTEDEEMSKCKSSVHHVRKMEKDVDMALARAKYPKRKTLSKELEEEESILKQCIEKLK
VVEANRLALVSQLREALSEQESELESIRTQIQVAEAQAGEASNMRKLLDDEDYVGQRKPP
ATASTSNDTCATAGQTSKKTAAAIAAEVADKLTASSSSQYIMSSVLSTFAAEAAKSAGLS
RPSSYPATNNFISQQEKPLSDSNALMPEQLFNPPPSNLYQSTLVPHPTVHGQMPNALGQY
HSLPNPTSQQYLQQSAGMVSPYGYGSIPALPSVPPPPAPPSYMTTMVSLTQQPLSMMQQQ
AVAQQQQVPPLPQQPPPPSFRPLTPIQPPQPPGGMVYYSQPHHSQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgttttgaatgagcagatacttgcagacaagctttccaagctcaatggcagt
caacagtgcattgaaacattgtcccattggtgcatcttccaccaagataaagcagagatg
gttgttacatcatggagtaaacagttccatagttccgaaatggctcagaaagtccctcta
ctgtaccttgcaaatgacatcctgcaaaacagcaaacgtaaaggaaatgagtttgtcacc
gagttttggaaggttcttccttcagcactcaaggaaattgtcggaaaagacgatgccctt
ggaaacaaagtagtttccagattggttaatatatgggaagaaaggagggtttttggatct
cgagcgcagaacctgaaagatataatgctgggagaagagctgccaccaccattagagttt
ggaagaaagcgaagtcgttctgtcagaatagttaaaagggacacgcggtccataaaaacg
aaattgaccgttggaggaacagctgaaaaaatagtgtcagcatttcacttggtagtcagc
gagcgtactactgaagatgaagaaatgagcaaatgcaagtcttctgttcaccatgtgcga
aagatggaaaaagatgtcgacatggcccttgcaagagcaaaatatccaaagagaaaaacc
ttgtccaaagaattggaggaggaagaaagtattttgaaacagtgtattgagaaacttaaa
gttgtggaggcaaatagattggctcttgtatcacagttaagagaagcactaagtgaacag
gaatctgaactagagagcattaggactcagatacaggtggcagaagcacaggcaggggaa
gccagcaacatgcgaaagcttctggatgatgaagattatgtgggacaaagaaagcctcca
gctacagcatctacatcaaatgacacctgtgcaacagcaggacaaacaagcaagaagaca
gctgcagcaattgcagctgaggtagctgacaagcttacagcttcaagctcctctcagtat
atcatgtcatcggtcctctctacatttgctgctgaggcggcaaaatctgctgggctgtca
agaccttcatcgtatccagccaccaacaattttatatcacaacaagaaaagcctctatca
gattcaaatgctttaatgccagaacagctatttaatcctcccccaagtaacctttatcag
tcaacgctggttcctcatcccacagtgcatggtcaaatgccaaatgctctgggtcaatat
cattcacttcctaatccaacatcccagcagtatttgcaacaatcagctggaatggtgagc
ccttatggttatgggagtattcctgccctgccatctgtaccacctccaccagcacctcct
tcgtatatgactacaatggtgtctttaacacagcaaccattgtcgatgatgcagcagcag
gctgtagcacaacagcaacaagtaccaccattacctcaacaacctcctcctcctagtttc
cgtcctttgacacctatccagcctccccagcctcctggaggaatggtgtactattctcaa
ccacatcattcacaatga
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