Capsicum annuum (peppers): 107873273
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Entry
107873273 CDS
T04646
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107873273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cann03400
]
107873273
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107873273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
107873273
NCBI-ProteinID:
XP_016575532
UniProt:
A0A1U8GWB4
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Position
6:76389558..76396942
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AA seq
263 aa
AA seq
DB search
MGSASPKQTCLKLEIPNNKDKIFVKGTWYPSYFQLFITDGLHAWTCHGSEEEVEERALQW
DQPVSEYIELAEKYLGFQQPDSVYGFDDAGSGHKRLSWTFEKEGTKLEWRWKCQPSPNSQ
KTTADILDFLMDANIRLSDEVVDKTQSFERLRVEADKCLTQSEILSKEKEEFESAIYAKF
VGVLNSKKKKLRELRDRLSKQGTSVEEPVEEDAQSTDRTETFDEGSNEEISGEEVEKEDV
GTSSKKDDVGTSNPRRGRGRKRK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagcaagtccgaaacagacatgtctcaaactggaaatcccaaataataaggat
aaaatattcgtgaaaggcacatggtatccttcttactttcaactcttcatcactgatggc
ctccacgcttggacttgccatggatcggaggaagaggttgaagagagagcattacagtgg
gatcaacccgtttctgagtatattgagttggctgaaaagtatttgggatttcagcagcct
gactctgtttatggctttgatgatgctggttctggccataaaaggctctcatggacattt
gagaaagaaggcacaaagctagaatggcggtggaagtgccaaccatctcctaatagccaa
aaaactacagctgatatcttggacttcctcatggatgctaatattagactgagtgatgaa
gtggtcgataaaactcagtcatttgagaggctgagagtggaggcagataaatgtttaaca
caaagcgagatactcagcaaagagaaagaagaatttgaatctgcaatatatgcaaagttt
gttggggttctgaactcaaagaagaaaaaactcagagagcttcgcgataggctctcaaaa
cagggaacctctgttgaagagccagtagaagaggatgcacaatctactgacagaaccgag
acctttgacgagggaagtaatgaggaaataagcggggaagaggtggagaaggaagatgtt
ggcacttcatcaaaaaaggatgatgttggcacttcaaatcccagaaggggtcgtggtaga
aagagaaagtaa
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