Capsicum annuum (peppers): 107873497
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Entry
107873497 CDS
T04646
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107873497
04121 Ubiquitin system [BR:
cann04121
]
107873497
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107873497
Membrane trafficking [BR:
cann04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107873497
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107873497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
HypA
zf-RING_16
Rad50_zn_hook
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
107873497
NCBI-ProteinID:
XP_047270639
LinkDB
All DBs
Position
6:24368835..24370830
Genome browser
AA seq
382 aa
AA seq
DB search
MSSYWCYRCTRFVRISAGNDVVCPHCDSGFIEFAEGNIAGSPESRRRFPDRSSVNMGSRR
SRRNNRGDRSPFNPVIVLRSPSEAARGGEDEAVAAAAEERSYELYYDDGEGSGLRPLPPT
MSDFLMGSGFDRLLDQLAHIEVNGFGRPENPPASKSAIESMPIVQISSNHVNSETHCAVC
KEAFELGSEAREMPCEHIYHSDCILPWLSLRNSCPVCRHELPSESTENANSDSLARGRNE
EEAMGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGVPRRIAWRSRRSNT
GRNGSGISRIFSNFASFFRRLTPSNQRRSLSIHSSSSDSSGSGSGSAVFRSRSVSNTSIF
SRYLRRSRRNWAPEESNGVTRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttactggtgttacaggtgtacaaggtttgttagaatttcagctggaaacgac
gtcgtttgtccccactgtgacagtggatttattgaatttgctgaaggtaatattgctggg
tcaccggaatctcgccggagatttccagatcggagtagtgtcaacatgggttctcggcgg
agccggcgtaataatcggggtgatagatctccgtttaacccagttattgttcttcgtagt
ccatctgaggcagctcgtggtggagaggatgaagctgttgctgctgctgctgaggagagg
agttatgagctctactatgatgacggtgaaggttccggtctccgaccgttacctccaacg
atgtcggattttttgatgggatctgggtttgataggttactagatcagttggcgcacatc
gaggtgaacggttttggtcggccggaaaatccaccggcgtcgaaatcggctatcgaatcg
atgccgattgtacaaatatcttccaatcatgtgaattctgagactcattgtgctgtttgt
aaagaagctttcgagttaggatcggaagctcgtgaaatgccctgtgaacatatttaccat
tccgattgtatacttccatggctgtctcttcgtaattcgtgtccggtttgccgacacgaa
ttgccttcggaatcgacggaaaatgctaactccgatagcttagctcggggtcgaaacgaa
gaagaagctatgggattgacaatatggaggttaccgggaggtggattcgccgtgggaaga
ttttcgggtggaagaagaggagctgaaagggaacttccggtagtgtatacagaaatggac
ggtgggtttaacaatggtgtaccaagaagaatagcttggagatcaaggaggagcaataca
ggtcgaaatggcagtggaataagtcgaattttcagcaatttcgcatcgttttttaggcga
ttaacaccgtcaaatcaacgaagatcgctctcgatacattcgagtagttcggattcatca
gggtctggttctggatctgctgttttcaggagtcgaagtgtgtcgaatacttcaatattc
agtaggtatttgaggagaagtagaagaaattgggcaccagaagaaagtaatggagtaacc
agatggtaa
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