Capsicum annuum (peppers): 107873623
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Entry
107873623 CDS
T04646
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107873623
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cann04812
]
107873623
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107873623
Cytoskeleton proteins [BR:
cann04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107873623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Vac14_Fab1_bd
HEAT_EZ
TOR1L1_N
HEAT_2
PDS5
Cnd1
Adaptin_N
HEAT_Maestro
INTS1_R4
MMS19_C
MMS19_N
UTP20
TPR_TTI1_C
HEAT_DAAF5
RRP12_HEAT
Rrn6_HB
Dopey_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
107873623
NCBI-ProteinID:
XP_016576028
LinkDB
All DBs
Position
6:complement(2929794..2947733)
Genome browser
AA seq
1434 aa
AA seq
DB search
MEAALDLARAKDTKERMAGVEHLHQFLEGSRKTLSTNEATSLVDVCLDLLKDNNFRVCQG
ALQSLASAAVLSGEHLKLHFNALLPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWMHKSFRVREEFARTVTSAIGLFASTELPLQRAILPPILQMLNDPNHGVREAAL
SCIEVMYSEVGPQFRDELQRHHLPSMLLKDINARLEKIEPKSCSTDGISKNYSAVEVKSA
SLSSKKSSPKAKRSTREVSLFGADGDVTEKPVDPIKVYSEKELLREFENIGSTLVPEKDW
SMRIAAMQKVEALVLGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIIKQACHLLNFLSKE
LLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVGRALPRIADCAKNDKN
AVLRARCCEYALLILEHWPDASEVQRSAELYEDLIKCCVSDAMGEVRSTARILYRMFART
WPERSRRLLSSLDPAIQRIINEEDGSIHKRHTSPSVRERSSHFSLASQTSTSHLPGYGTS
AIVSMDRSTNLPAGTSLSSGLLLPQAKPVGVERSLESVLHASKQKVSAIENLLKGLDVSE
RSRSSSLDLGVDPPSSRDPPFPLAVPASTSRTNALLDDAPSAMTKGNNRNGGLVLSDIIT
QIQASKDSAKASYRGSADHETFSALNSYTARRASEKLQDRGLVEENGELRDIRRLMNSHV
DRQYLETPYKDAVRDSHNNHVPNFQRPLLRKNTAGRMSASRRRSFDDSQLPLGDLSSYVD
GPASLNDALSEGLNSTSDWKARVAAFSYLRSLLQQGPRGIQEITQSFEKVMKLFFQHLDD
PHHKVAQAALSTLADLIPACRKPFESYVERILPHVFSRLIDPKELVRQPCSTTLEIVSKS
YGIDSLLPALLRSLDEQRSPKAKLAVIEFAIGSFNKNPSNAEGAANIGILKLWLAKLTPL
VHDKNTKLKDAAISCIISMYTHFDSIGVLNFILSLSVEEQNFLRRALKQRTPRIEVDLMN
FVQSKKEKQRSKSSYDPSDAIGTSSEDGYIGTSKKSNLFGRYSGGAVDADSMRKWNSLLD
PTYMNRSIGQLSDGTQDFYHGVETGPNTDISVSKAKDLKFGTLSTSENDGLLTTLESKDS
SSNIEQTSTPHLDVNGLVDSDHLQIAHDAGADNGSLSDLGLSHQKLFALKIIPTLETGPS
IPHILHLICNGDDGSSAANKREALQQLVKASVANDQSIWVKYFNQILTAVLEVLDDSESW
TREIALSLILEMLKNQKNAMEDSIEIIIEKLLHVTKDEVAKVANEAENCLSTILSQYDPF
RCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMSQLSSFLPSLFDAFGNQSADVR
KTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARAGTPVDASHS
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcttgatttagcgcgtgcaaaagacacaaaggaacgaatggcaggtgta
gaacatctacatcagtttctagaaggttctagaaaaaccctgtcgactaacgaagctact
tcgctcgtcgatgtttgcttagatcttttgaaggataacaattttagggtttgtcaaggt
gctttacagtcacttgcttcagctgctgttttgtctggtgagcatttgaagttgcatttt
aatgcgttgttgcctgctgttgttgaacgattgggtgatgcaaaacagcctgttagagat
gctgctagaaggttgctgcttactttaatggaggtttcttcaccaacaattatagttgag
agggcggggtcttatgcttggatgcacaaaagctttagagttcgagaagaatttgctcgt
actgttacatcagcaattggtctttttgcgtcgacagagctgccccttcaacgggctatt
cttcctccaattttgcaaatgttgaatgatcctaatcatggagtgagggaagcagcctta
tcatgtatcgaggtgatgtattcagaggttggaccccagttccgcgatgagcttcagcgc
catcatcttccttccatgttgctaaaagatattaatgcgagacttgagaagattgagcct
aaaagttgctctacagatggaatctcaaagaattattcagctgttgaggtgaaatctgct
agtcttagttccaagaaaagcagtcctaaagcaaaacgttcaacaagagaggtgtctctc
tttggagcggatggtgatgttacagaaaagcctgtcgacccaattaaagtatattcagaa
aaggaactgctaagggaattcgagaatattggctccactcttgtaccagaaaaagattgg
tcaatgcgtatcgctgctatgcagaaagttgaagcacttgttcttggaggtgcagctgat
tatccttgttttcgtgggcttctaaagcaacttgttggccctttgagcacacagttatca
gatcggcgatccagcataatcaaacaggcatgtcatttactaaacttcttatcaaaagag
ctgttgggagattttgaggcatgtgctgagatgttcattccggttcttttcaagcttgtt
gtgataactgttcttgtgattgcagaatctgctgataactgcataaagacgatgttgcgt
aactgcaaagttggtcgggcacttcctcgtatagctgattgtgcaaagaatgacaaaaat
gcagtacttcgtgcaagatgctgtgaatatgcacttctgatccttgaacattggcctgat
gcatctgaggtacaacgttcagcagagctctatgaagaccttataaagtgttgtgtctct
gatgcaatgggtgaggtccgatcaactgcaagaattttgtacagaatgtttgcaagaact
tggccagaacgttctaggcgtttgctttcgtccttggatcctgctatccaaaggatcata
aatgaggaagatggtagtattcataagcgacacacttctccctctgttcgagagaggagt
tcacacttctcacttgcttctcaaacatctacttcacatctacctggttatggaacatct
gcaatagtttccatggatagaagtaccaatttgcctgcaggaacgtccctgtcctctggg
ctgcttttgcctcaagcaaaacctgtgggagtggaacgtagcctcgagagtgtacttcac
gcgagcaaacagaaagtttctgctatagaaaacctgctcaaaggtctagatgtatctgag
agaagtcgctcctccagtttggatctaggagttgacccgccctcatcccgtgatccacca
ttccctcttgctgttcctgcatcaacaagtcgtactaatgctttactggatgatgcacca
tctgctatgactaaaggaaataatcgcaatggtgggttggttttgtctgatatcataact
cagatccaggcctcaaaggattcagctaaagcatcataccgaggtagtgcggatcatgag
actttttcggcactcaactcctacactgcaagaagagcttcggaaaagctacaggataga
ggacttgttgaagagaacggcgagctgagggacattaggcggttaatgaactcacatgtt
gacagacaatacttagagacaccttataaagatgctgttagggactcccacaataatcac
gttcccaattttcaacgtcctctcttaagaaaaaatacagctggtagaatgtcagctagt
aggaggaggagctttgatgacagtcaacttcctctgggagatctatctagttatgtggat
ggtcctgcttcactaaatgacgcattaagtgagggtctcaattctacttcagattggaaa
gccagggtagctgcattcagctatctccggtctttgctacagcagggccctagaggtatt
caggaaatcactcaaagttttgagaaggttatgaaattgtttttccagcatcttgatgat
ccccatcataaagttgcacaggcagcactttcaactcttgcagatcttattcctgcttgc
agaaagccatttgaaagttatgtagagaggatcttgccacatgttttctcgcggttaatt
gatcccaaagaactggtgaggcagccctgctcaactacgctagaaatagttagcaagtca
tatggtatagattcccttttgccagctttgctacgttcattagatgagcagcgttctcca
aaagctaaactcgctgtaattgagtttgcaattggctcatttaataagaatccttcaaat
gctgaaggtgctgctaacattggcatcctcaagttatggcttgcgaagttgacacctttg
gtccatgataagaataccaaactgaaagatgcagccatttcttgcattatatcaatgtac
acacacttcgactcgataggagttctgaattttattcttagcttatcagttgaagaacaa
aatttcttgagacgggctcttaagcagcgcacacctcgtatagaagtggatttgatgaat
ttcgtgcagagcaagaaagaaaaacaacgatccaagtcttcatatgatccatctgatgct
attggaacatcatctgaagatggatatattggcacttcaaagaagagtaatctatttgga
aggtattctggtggtgccgttgatgctgatagcatgagaaagtggaactctcttctagac
ccaacctatatgaataggtctattggccagttgtctgatggtactcaggacttctatcat
ggtgtggaaactggtcccaacactgatatttctgtttcaaaagccaaggatttgaaattt
gggaccctttccacaagcgagaatgatggattattgactacattggaaagcaaggacagc
agttcaaacatagaacagacctccactcctcatctggacgtcaatgggttagttgattca
gaccatctacagattgctcatgatgccggagctgataatgggtctttatctgacctgggg
cttagtcaccaaaaactttttgctctcaagataattccaactctggaaactgggccaagc
atccctcatattcttcatttgatttgcaatggtgatgatggtagttctgctgctaacaag
cgggaggcacttcaacaattggtcaaagcttctgttgctaatgatcaatccatctgggtc
aagtacttcaatcagatattaactgctgtacttgaggtgttagatgattctgagtcgtgg
acaagggaaattgccctatctctgattcttgaaatgctgaagaatcagaaaaatgcaatg
gaggactccattgagatcataattgagaagctgctccacgtgaccaaggatgaagtggca
aaagttgcaaatgaagctgagaattgtttatctacgattttgtcccagtacgacccattc
agatgcttaagtgttattgttccactgcttgtcaccgaagacgagaagactcttgtaact
tgtataaactgtttgacaaagcttgttgggagactctctcaggaggaattgatgtctcag
ctgtcttccttcttgccttccctgtttgacgcttttggaaaccagagtgctgatgtccgc
aagactgttgtattctgtttggtcgacatatacatcatgctgggcaaagcatttttgcca
tacttggaagggctgaacagcacacagttgcgattagtgactatttatgctaaccgaata
tcacaggcaagagctggtacgccagtagatgctagccatagttaa
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