Capsicum annuum (peppers): 107873700
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Entry
107873700 CDS
T04646
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107873700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107873700
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107873700
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
107873700
NCBI-ProteinID:
XP_016576111
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Position
6:complement(899157..903356)
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AA seq
594 aa
AA seq
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MVNTLPLEVLEHIFSSITTDKDRNSISLVSKTWYEAERCCRKNVFIGNCYAVSPSILIRR
FPDIRSVNIKGKPHFADFDLVPEGWGAYFYPWVVTMAKAYPFLEEIRLKRMVVCDESLEL
ISKSFKNFKVLVLQSCEGFTTDGLAAIAANCRNLRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEVSFSALERLVARSPHLRTLRLNRAVSIEKLPKLLRHASQLVEFGTGS
YSADTQVDVSEVFVNVSQAFSGCNKLKGLSGFWEAAPAYFPTIYPVHSKLTSLNLSYATV
EIPDLGKLISHCHNLQRLWVLDYVEDSGLEEIANSCKELQELRVFPSDPFAPGPNVSLTE
KGLVAVSVGCPKLQSVLYFCRQMTNDALVTIARNRPNMIRFRLCIIEPQTPDYSTLEPLD
AGFGAIVQHCKELRRLSLSGLLTDRVFEYIGVHAKKLEMLSLAFAGDSDLGLHYVLSGCE
SLRKLEIRDCPFGDEALLANAAKLETMRSLWMSNCSVSFEACKLLAQKLPRLNVEVIDER
GHPDTRPESCPVEKLYVYRTVSGRRFDTPGFVWIIDEDPSSTPYSNGNRSLASA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacacacttccattagaagtacttgaacacatattttcaagcataactacagac
aaagacaggaactcaatatccttagtaagtaaaacatggtatgaagctgaaagatgttgt
aggaagaatgtgttcattgggaactgttatgctgttagtccatcaatcttgataagaaga
tttccagatattagatctgtaaacattaaagggaagccacattttgctgattttgatcta
gtacctgaaggatggggtgcatatttttatccatgggttgttacaatggctaaagcttat
ccatttcttgaagaaattagacttaagagaatggttgtttgtgatgagtcattggagttg
atttctaagtcttttaagaattttaaagtcttggttttacagtcttgtgaagggtttact
actgatggacttgctgctattgctgctaactgcaggaatctgagagaattggacttggga
gaaagtgaagtggaagacctgagtggtcattggcttagtcattttcctgatagctgcaca
tcgctcgtgtcacttaacattgcttgtttggcttcggaggtcagcttctcagctttggag
cgtctagttgctcgctctcctcatttgaggactcttcggctcaatcgtgctgtgtccatc
gagaaacttccaaagctacttcgtcatgcttcacagttggttgaatttggtaccggatct
tactcagctgacacacaggttgatgtttccgaagttttcgtaaatgtatctcaggctttt
tcgggctgcaataaactcaaaggcttgagtgggttttgggaggccgcgccagcctacttt
ccaactatttatccagttcactccaaactcacctctttgaatttaagctacgctaccgtt
gaaatacctgatcttggcaagctcatcagccactgtcacaatttacagcggttatgggtg
ctagattacgttgaagatagcggtcttgaggagattgccaactcttgtaaggaacttcaa
gagcttagggtgttcccgtctgatccatttgctccaggaccgaacgtatccttgacagag
aaaggtcttgtggctgtctcagtgggctgccctaagcttcaatcagttttatacttctgc
cgccaaatgacaaatgatgcgttggttactattgcaaggaaccgtcctaatatgatccga
tttcgtctgtgtattatcgagcctcaaacacctgattactcaacccttgaaccacttgat
gctggttttggggccattgtgcaacactgcaaggaattgcggcgactttctctttctggc
ctacttacagatcgtgtgtttgagtacattggggtccatgctaagaagttagagatgctt
tccttagcttttgcaggagatagcgatctaggcctccactacgtgctctctggttgtgag
agcctccgtaagttggagattagagactgcccctttggtgacgaggctctgttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtccaactgttcagtaagttttgaa
gcatgtaagctgctagcgcagaagttgccaaggcttaatgttgaggttatagatgagagg
ggtcatccggatacgaggccagaaagttgccccgttgagaaactttacgtatataggaca
gtgtcagggaggaggttcgacactcctggttttgtttggataattgatgaagatccatca
tcgactccatatagcaacggaaatcgctctctggcttctgcttag
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