Capsicum annuum (peppers): 107875207
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Entry
107875207 CDS
T04646
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107875207
Spliceosome [BR:
cann03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107875207
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_3
RBD_DGKtheta
RBD_DEAH11
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
107875207
NCBI-ProteinID:
XP_047270190
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All DBs
Position
6:226465100..226470878
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AA seq
416 aa
AA seq
DB search
MAREKSEESVKLFVGQVPKQMTEEQLMEMFRKLAVIEQVSIIKDKTTRASRGCCFLICPS
REEADKAITAYHNKHTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEVYSLFSQ
YGTITYLQILRGSQQTSRGYAFLKYEKKEHAIAAVEALNGKHTMEGATLPLVVKWADTER
ERQARRAQKALSHASNAPNSGQHPSFYGSLSTGYMPPYNDYAYQTPGTYGLMQYRQPSVQ
NRPSFQNMVPSTNQGGTLRGVAPGIAPRNYAMSPGSYLASAYRGVQGLQYPSRYPGGITG
YLPPYTSNRHSAASSSVDSNRGGQVEGPAGANLFIYHIPQEFGDQQLADTFQQFGKVLSA
KVFVDKATGVSKCFGFVSFASPDDAQSTIKMMNGFQLDGKKLKVQLKRENKQNKAY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgagaagagcgaagagagcgtgaagctgttcgttggtcaagtgccgaagcaa
atgacggaggaacagcttatggagatgttcagaaagttggcagttattgaacaagtcagc
atcatcaaagacaagactacacgcgcttctcgaggatgttgctttctcatttgtccctcc
agggaagaagcagacaaggctataactgcttaccacaataaacacacacttcctggggct
tcaagtccgttgcaagtgaagtatgctgatggcgagttggaaaggctagagcacaagctt
tttgtgggtatgttgccaaagaatgtttctgaccccgaagtctactccttattctctcaa
tatgggaccattacttatttgcaaattctcagaggttctcagcaaactagtagaggatat
gcttttctgaagtatgagaaaaaagaacatgcaattgcagcagtagaggcccttaatgga
aagcatactatggagggtgcaactctccctttggtagtcaagtgggcagatacagaaagg
gaaaggcaagctaggagggctcagaaagctttatctcatgcatctaatgctcccaactct
gggcagcatccatctttttatggctctctatccacgggttatatgcctccatataatgac
tatgcttatcagactcctggaacatatgggctcatgcagtaccgtcaaccatcagtacag
aaccgaccctcatttcagaatatggttccatccacaaatcaaggaggtactctacgtgga
gttgcccctggaattgccccaagaaattatgccatgtcgcctggaagctatctggcatct
gcttacaggggtgttcaagggcttcaatatcccagtcgctatcctgggggcattactggt
tatctacctccttatacctctaacagacattctgcagcatcttcaagtgtcgattcaaat
agagggggtcaagttgaaggtccagctggtgctaatttatttatttaccacattcctcaa
gaatttggtgatcaacagcttgcagacacatttcaacaatttggtaaggtcttgagtgcc
aaagtttttgtggacaaagctactggtgttagtaaatgttttggatttgtaagtttcgcc
tctccagatgatgcacaatctacaatcaaaatgatgaatggtttccaactagatgggaaa
aagttgaaggttcagcttaaaagagaaaataagcagaacaaagcttattga
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