Capsicum annuum (peppers): 107875214
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Entry
107875214 CDS
T04646
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107875214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107875214
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107875214
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
F-box_5
LRR_4
F-box-like
LRR_8
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
107875214
NCBI-ProteinID:
XP_016577309
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Position
6:complement(226383229..226387272)
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AA seq
580 aa
AA seq
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MASASLPEQVLKHLFSFLTSDKDRNCVSLVCKLWYEVERRCRRSVFIGNCYAVTPDIMIR
RFPQLTSLTLKGKPHFADFNLVPDGWGAYVDPWIAAMSQSYPFCLEEIRLKRMVVTDESL
ELISTSFHNFKVLILLSCEGFTTDGLAAIAANCRNLRELDLGESEVEDLSSDWLSHFPDG
CTSLVSLNISCLGSEINFSDLERLITCSPNLKTLRLSQAVPLEKLPDLLCRAPQLVEFGT
GAYSSEVQSDVFSNLEEAFSGCKKLEGLSGFWDVTPAYLPAVYPVCSRLTSLNLSYATIQ
NPDLNKLISRCHNLQRLWVLDYIEDTGLQALAASCKDLQELRVFPSDPFGPEPNVSLTEQ
GLVAVSDGCPKLQTVLYFCRQMTNAALVTIARNRPNMICFRLCILEPRSPDYLTLEPLDA
GFGAIVEQCKELRRLSLSGLLTDRIFEYIGAHAKKLEMLSVAFVGDSDLGLHHVLSGCES
LRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACELLSQKMPRLNIEVIDENG
PPDTQSESCPVEKLYIYRTVAGPRFDMPGFVRIMNQDAAH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcctcactcccagaacaagtgttgaagcacctcttctctttcttaacctca
gacaaagaccgcaactgtgtctccttagtctgtaaattgtggtacgaggtggagaggcga
tgcaggaggagtgtcttcatcggaaactgctacgccgttactcctgatattatgatcaga
cgtttccctcaactcacttctctcactctcaaaggaaagccccattttgctgactttaat
ctcgtccctgacggctggggtgcctatgttgatccttggattgctgccatgtcccaatct
tatcctttttgcctcgaggagattagacttaagcgaatggttgttactgatgagtctttg
gagttgatatccacctcttttcacaatttcaaggtcttgatcttgttgtcttgtgaaggc
tttactactgatggacttgctgccattgctgctaactgcaggaatctgagagaactagac
ttgggagaaagtgaagtggaggacctaagtagtgattggctcagtcattttcctgatggc
tgtacttcactggtgtcacttaacatttcttgtttgggttctgagatcaacttctcggat
ctggagcgtctgattacttgttctcctaatttgaagacacttcggctcagtcaagctgtg
ccccttgaaaagcttccagacctattatgccgtgctccacaattggttgaatttggtaca
ggtgcctactcctctgaggtacagtctgatgttttctcaaaccttgaagaagctttttca
ggctgcaagaaacttgaaggcttgtctggattttgggatgtcacgccagcttaccttcca
gctgtatatccagtttgctccagactcacctcattgaatttaagctatgctactattcaa
aaccctgatcttaacaagctcataagccggtgtcacaatttgcagagattgtgggtacta
gactacattgaagataccggtctccaggcacttgctgcttcctgtaaggaccttcaagaa
cttagggtgtttccttctgatccctttggtccagaaccaaatgtttccttgacagagcag
ggtcttgtagctgtctcagatggttgccctaagctccaaactgttttatatttctgccgc
caaatgacaaatgccgctttggttactattgctagaaaccgtcctaacatgatttgtttt
cgcttgtgtattttggaacctcgatctcctgattacttgactcttgaaccgcttgatgct
ggttttggggcaatagtggaacaatgcaaagagttgcggcgactttctctttctggcctt
cttactgaccgtatatttgagtacattggggcccatgctaaaaagttggagatgctttcc
gtcgcatttgttggggatagtgatttgggcctacaccatgtgctctctggttgtgaaagc
cttagaaaactagagatcagagactgtccctttggagacaaggctcttttggctaatgct
gcaaagctggagacaatgagatccctttggatgtcttcttgttcggtaagttttggagcc
tgtgagctgctaagtcagaagatgcctaggcttaatattgaagttatagatgagaatggt
cctcccgacacgcagtcggaaagctgtcctgttgaaaaactttacatataccggacagtg
gctggaccaaggtttgacatgcctggttttgttcggataatgaatcaagatgccgcacat
tag
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