Capsicum annuum (peppers): 107875255
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Entry
107875255 CDS
T04646
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107875255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107875255
03032 DNA replication proteins [BR:
cann03032
]
107875255
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
Sm proteins
107875255
U2 snRNP components
107875255
Complex B
U1 snRNP components
107875255
U4/U6.U5 tri-snRNP components
107875255
Complex C
U2 snRNP components
107875255
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107875255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
107875255
NCBI-ProteinID:
XP_016577375
LinkDB
All DBs
Position
6:226747262..226750695
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTAVHGTITGVDVSMNTHLKAVKIMLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEDTPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagatttttgatgaagctcaacaacgagactgtctcaattgagctcaaa
aacggcaccgctgttcatggaaccattacaggtgtggatgttagcatgaacacacacctg
aaggctgtcaaaattatgcttaagggaaagaatccagtgactttggatcacctgagtgtg
aggggtaacaacatccgttattacattctccctgacagcttaaatcttgagacgctgctg
gtggaagatacacctagggtgaagccaaagaagccaacagctgggaagcctttgggacgt
ggtcgtgggcgcggtcgtgggcgtggacgtggtcgaggccgttaa
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