Capsicum annuum (peppers): 107875256
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Entry
107875256 CDS
T04646
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107875256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107875256
03032 DNA replication proteins [BR:
cann03032
]
107875256
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
Sm proteins
107875256
U2 snRNP components
107875256
Complex B
U1 snRNP components
107875256
U4/U6.U5 tri-snRNP components
107875256
Complex C
U2 snRNP components
107875256
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107875256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Gp138_C
Motif
Other DBs
NCBI-GeneID:
107875256
NCBI-ProteinID:
XP_016577376
LinkDB
All DBs
Position
6:226739692..226746604
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKAVKITLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEDTPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcagatttttaatgaagctgaacaacgagacggtctcaattgagctcaaa
aatggcaccgttgttcatggaactattacaggtgtggatgtgagcatgaacacacacctg
aaggctgtcaaaattacgctaaaggggaagaatccagtgacgttggatcacctgagcgtg
aggggtaacaacatccgttattacatcctcccagacagcttaaatcttgagacgctgctg
gtggaagatacacccagggtgaagccaaagaagccaacagctggaaagcctttgggacgt
ggtcgtgggcgcggccgtggacgtggacgtggtcgaggccgctaa
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