Capsicum annuum (peppers): 107875300
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Entry
107875300 CDS
T04646
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107875300
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107875300
Meiosis-specific proteins
Cohesin complex and associated proteins
107875300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
CENPH
ABC_tran
FapA
Laminin_II
SbcC_Walker_B
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
107875300
NCBI-ProteinID:
XP_016577447
UniProt:
A0A1U8H1W0
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All DBs
Position
6:227765787..227781407
Genome browser
AA seq
1215 aa
AA seq
DB search
MASPGKIHRLELENFKSYKGFQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLR
GAQLKDLIYAFDDREKEQRGRRAFVRLVYQLVNGAEIQFTRAITSAGASEYRIDGKAVNW
DEYNAKLKSLDILVKARNFLVFQGDVESIASKNPKELSALLEQISGSEEFKRRYDELEEE
KARAEEKKALAYQKKKTVTMERKQKKEQKEEAEKHLRSQDQLKSLKLEHFLWQLFNIEKD
FAKTNEELDDEEARVKEIVEKLGEYESESSRKKKELSGYMKEIALRERKIADRKNKLDKN
QPDLLKLKEEISRIASKIKSTSKDLDKKREEKRRHADEMKKLQNDLTDISKQLDDLRQRS
RDAGGKLQLADSQLETYHQIKEEAGMKTAKLRDEKEVLDRQQRADIDAQKNLVENLQQLE
NRKHELESQEKQMQGRLKKILDAVKKHDEELKRVKEEQREMKSKLQRSRDKHDNLRKRLD
EVEDQLRELKAERHENERDARLSQAVETLKRLFPGVHGRMTDLCRPTQKKYNLAVTVAMG
RYMDAVVVEDEQTGKECIKYLKEQRLPPQTFIPLQSVRIKPIVERLRTLGGTAKLVFDVI
QFDQALERAILFAVQNTIVCDDLKEAKHLSWSGERLKVVTVDGILLTKSGTMTGGTSGGM
EARSHKWDDKKIEGLKKKKEALESELEELGSIREMQLKESEASGRISGLEKKIHYAEIEK
KSIADKLQNLEREKGSIENEIGHIQPELEQLNRKIDARAQEISSREKRINDIVDRIYKKF
SESVGVRNIREYEENQLKAVQELSEERLNLHNQQSKLKSQLEYEQKRDMDSRIVKLESTL
NNLKEKLKEVEAKEVDLKSSMEKATREIDDFKEEVLAWKSKSEECERQLQEWQKKISAET
TSISKHNRQIKSKEAQIEQLNSRKQEILEKCELEQIELPIISDPMDTGESTPGPVFDFSK
LSRTYQQITKPVEREKREVDFTQKIASLMSEIERTAPNLKALDQYKDLLQKEEEVNKEFE
VAKNEERKVTDEFNRVKGARYELFMKAFNHISGKIDKIYKQLTKSHTHPLGGTAYLNLDN
EDEPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSFRPSPFFILDEVDAAL
DNLNVAKVAGFIRSKSCGGARVTQDPEEGCGFQSIVISLKDSFYDKAEALVGVYRDAERG
CSSTLTFDLTKYRES
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgggcaaaatccaccggctagaactggagaacttcaaatcgtacaaagga
tttcaaacaatcggtccgttttacgattttacagcaattataggaccaaatggagctgga
aaatctaacctgatggatgcaattagcttcgttctcggagttcgtacgggtcaacttcgg
ggtgcacagttgaaggacttaatttatgcttttgatgaccgtgaaaaagagcagagaggt
cgaagagcttttgtgagactagtttatcagcttgttaatggtgcggaaattcagtttacg
cgtgctattactagtgctggtgctagcgagtatcggattgatgggaaagctgttaattgg
gatgagtataacgctaaattgaagtcacttgatatacttgttaaagcacggaattttctc
gtctttcagggtgacgttgagtctattgcgtcgaaaaatccaaaagaactctctgcgctc
cttgagcaaatatctggatctgaagagttcaagagacgctatgatgaattggaagaagaa
aaagcaagagctgaagaaaagaaggcacttgcgtaccagaaaaagaaaactgtaactatg
gagcgaaaacagaaaaaggaacagaaagaagaagctgagaagcatcttcgctcacaagat
caattgaaatcgttgaagctagaacattttctttggcaattattcaacatagaaaaggat
tttgccaagaccaacgaggaacttgatgacgaagaagcaagagtcaaagaaattgtggag
aaacttggggaatatgaaagtgaatctagcagaaagaagaaagaactaagtggatacatg
aaagagattgcactgcgcgagaggaagattgcagatagaaaaaacaaacttgacaagaat
caacccgatcttttaaagttgaaggaagagatatctcggattgcttcaaaaatcaaaagt
acaagtaaagatcttgataagaagagagaagaaaaaagaagacatgcagatgagatgaag
aagcttcaaaatgacttgacagacatttctaagcagctggatgacttgcgtcaaagaagt
cgagatgcaggggggaaacttcaattagctgacagtcaattggagacatatcaccaaatt
aaagaggaggctggcatgaaaactgcgaaactaagagatgagaaagaggtcttggatagg
cagcagcgtgctgatattgatgctcagaagaatctggtagaaaatcttcagcagcttgaa
aatcggaagcatgagcttgagtctcaggagaaacagatgcaaggaaggttgaagaaaatt
cttgatgcagttaagaagcatgacgaagaactgaaacgggtgaaagaagaacagcgcgag
atgaaaagtaaacttcaacgttccagagataaacatgacaatctgcgaaaacgactcgat
gaagtagaagaccaactgcgtgaattgaaggctgagagacatgaaaatgagagagatgcc
agattgtctcaagcggttgaaactctgaagcgtctgtttcctggtgttcatggtcgaatg
acagatctttgcaggccaacacagaagaagtataaccttgctgtaacagttgcaatgggc
agatatatggatgcagtagtagttgaggatgaacaaacaggaaaagaatgcatcaagtat
ttgaaagagcagagacttccacctcagacatttatacctcttcagtcggtccgtataaag
ccaatagttgagaggcttcgcacattgggtggaactgcaaagctggtttttgatgtcata
caatttgatcaagcattggagagggctattttatttgctgttcagaataccattgtttgc
gatgacttgaaagaagctaagcatcttagctggagtggagagagacttaaagttgtgact
gttgatgggattttattaacaaaatctggtacaatgactggtggtactagcggtggtatg
gaagcacgctctcacaaatgggatgataaaaaaattgaagggcttaagaagaaaaaagaa
gctcttgagtcagaattggaggagcttggatcaataagggagatgcagcttaaggagtct
gaagcatctggcagaatcagtggacttgagaaaaagattcactatgcagagatagaaaag
aaaagtattgcagacaaacttcaaaatttggaacgcgaaaaggggagtattgaaaatgaa
attggacatatccagcctgaacttgagcagttgaacagaaaaattgatgcaagggcacaa
gagatctcatcacgagagaaaaggatcaatgatatcgttgacagaatctacaagaagttt
agcgaatctgttggggtgaggaatattcgggagtatgaagaaaatcagctcaaagctgtt
caggaattgtctgaagaaaggctcaacttacataatcaacaatcgaagcttaagtcacag
ttggagtacgagcagaagcgagacatggattcacgtattgtaaagcttgaatcaaccctt
aataacttaaaagagaaattaaaggaggttgaggccaaggaagtggatctgaagtcgtcc
atggagaaagccacaagggagatagacgatttcaaggaagaagtattagcgtggaagtcc
aaatcagaagaatgtgaaaggcagctgcaggagtggcagaaaaagatttctgctgaaaca
actagcataagcaaacataaccgtcaaattaaatcaaaggaggcacagattgaacagctg
aattcaagaaagcaggagatattggagaaatgcgaattggagcaaatagaattgcccatt
atctctgatccaatggatactggagaatctacacctggccctgtttttgatttcagtaaa
ctgagtagaacgtatcagcagattacgaaaccagttgaaagggagaagcgtgaggtggat
tttacacagaaaattgcttccttgatgtcagagatagaaagaacagctccaaatctgaag
gcccttgatcaatacaaagatctactgcaaaaggaggaagaggttaataaagaatttgaa
gtggccaaaaatgaggagaggaaagtcactgacgaattcaatagagttaaaggggccagg
tatgaattgtttatgaaagctttcaatcatatatctggcaaaattgacaagatatacaag
caactcacaaagagccatacacatcctctgggtgggacagcgtatctcaacttggataat
gaagatgagccatttttacatggtattaagtataccgctatgcccccaacaaagcgtttt
cgggatatggaacagctttcaggaggagagaagacggttgcagcactagcattgcttttt
tcaatccacagttttagaccttccccattcttcatactggatgaagttgatgctgcattg
gataatctaaatgttgccaaagttgctggattcatccgatcaaagtcgtgtggaggtgct
agggttactcaggatcctgaggaaggatgtggcttccaaagcattgttatctctctcaaa
gacagcttttacgacaaagctgaagctttagttggtgtttacagggatgctgagagaggt
tgctcgagcacattgacatttgatctgaccaagtacagggaatcgtga
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