Capsicum annuum (peppers): 107875425
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Entry
107875425 CDS
T04646
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107875425
Enzymes [BR:
cann01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
107875425
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
107875425
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Hexapep_UGP3_C
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
107875425
NCBI-ProteinID:
XP_016577628
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Position
6:221447243..221454767
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AA seq
236 aa
AA seq
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MGPRWKGKGAEVKALADPISEIVRQLQSSLICANSRGLLSGTSVLLKADAELTSLLNRAC
FGRPRVTSEKNEQWFQLSMEEAFYLQYSLKCMKVVDQNDTELNNDVLWKHMTSRKESFPI
LFKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSAQVGSGRLRVWSDFH
CTLRLCGSVAKTLLILDIVPQQSCPTSPSCLDNYVVEEKTITRWSPEQGREKKSLI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaggtggaagggaaaaggggcagaagttaaagctcttgcagatccaatttca
gaaatagtccgacagctccaatcttctctgatctgcgcaaattctagaggactgctttct
ggtacgagtgtgcttcttaaagcagatgcagaactgacctccctcctcaatcgtgcatgt
tttggtaggcctagggtaacatcagaaaagaatgagcaatggtttcagctctccatggaa
gaagctttttaccttcaatattctctaaaatgcatgaaggttgttgatcaaaatgatact
gaactgaacaacgatgtgttatggaagcatatgacatccaggaaggaaagttttcccatc
ttattcaaagctttttctcaccttagaagtaagaactgggtggttcgatcgggctctcag
tatggggtagactttgttgcctatcgtcatcatcctgctttggtacattccgaatatgct
gtgctcgttttatcagcacaagttggcagtggtcgattgagggtttggtccgacttccac
tgcacccttcgcctttgtggtagtgtggcaaaaacattattaattctcgacattgttcca
cagcagagttgtccaacttctccatcgtgcttagataattatgttgttgaagagaaaaca
atcacaaggtggagtccagaacaaggccgtgagaaaaaaagtttaatctga
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