Capsicum annuum (peppers): 107875449
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Entry
107875449 CDS
T04646
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107875449
09122 Translation
03015 mRNA surveillance pathway
107875449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
107875449
Spliceosome [BR:
cann03041
]
Complex A
Other components
Complex A specific factors
107875449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
107875449
NCBI-ProteinID:
XP_016577661
LinkDB
All DBs
Position
6:224480857..224485530
Genome browser
AA seq
486 aa
AA seq
DB search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NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctggtacctacggttacgaaggcggcggatctgcgccgccacctagtggcgtaaac
tatggaggtagcggcggcgggtatggatccggcggtggaggatatggtggttctggttca
ggtggtggttacggaggcggcagtggcggatcatacggtggcggcggtggtagaggtggt
ggtggtcgaggaggtggaggatatggtggtggtggttcgcataatcgaggaggcggcggt
ggatatcaaggaggagatcgcggaggcggcggtggataccaaggcggagatcgtggtggt
ggcggaggataccaagggggagatcgtggaggcggcggtggatatcaaggaggagatcat
ggaggcggcggtggataccaaggcggagatcgtggaggtcgcggcggcggtcgcggtgga
ggtggtaaggaaggtgattggcgttgccctaacccaagttgtggaaatttgaactttgct
agaagagttgaatgtaacaaatgtggtgcaccttcacctgctggttctgacgatcgtggt
ggcagaggtggtggcagttataacagaggtggaagtgatgggggatatggaaatagtcga
gggggaagaggtgacaactatgatagcagaaatgctggaggtggtaggactggttcttac
ggtggtagtcagggaagagatggtggtggttatgctcatggtcctccacatgctcctcca
tcttatggggcagctgatggcaactatccaccaccttctaatacttatggtggaaatcct
gatgcagttccaccacccacgagttatgttggtggacctgcatcatatcccccttcgtat
ggtgcccctggcggatatggtggggatacatcagctgatgcccgtgggggtggacgaggt
ggtccaccaggaggatatgatgggggatatggcagtggtggccggaatgcaggaggtggt
tatggtagtgctccagctgaggctcctgtaaaggtcaaacaatgtgatgagaactgtgga
gatttctgtgacaacgcaagaatatatatctcaaatttgcctcctgatgtgaccattgaa
gaacttagagaactttttgggagcattggacaagtggcaagaatcaagcaaaaacgtggc
tataaagatcagtggccttggagcataaagctatacacagacgaacagggaaacaacaaa
ggagatgcagttttgtcatatgaagatccgtctgcagcgcactctgctggaggctttttc
aataatcatgacttcagaggttacaaaatcactgttgggatggctgaaaagtccgctcca
aagcctcctccagcatttggttctggccgtggcggtcgaggaggttatggtggtggtggg
cgccgggataactacagagacagtggaggttctggaccagatagacagtttcatggtgga
aaccgttcacgtccttactga
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