Capsicum annuum (peppers): 107875470
Help
Entry
107875470 CDS
T04646
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00750
Vitamin B6 metabolism
cann01100
Metabolic pathways
cann01240
Biosynthesis of cofactors
Module
cann_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
107875470
Enzymes [BR:
cann01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
107875470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
107875470
NCBI-ProteinID:
XP_016577689
LinkDB
All DBs
Position
6:223890942..223892551
Genome browser
AA seq
309 aa
AA seq
DB search
MAGSGVVTVYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM
ALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDE
SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH
VRSVMGDIRVLRNMDDDEVFTFAKKIQAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL
MMQLGCDGVFVGSGIFKSGDPAKRGRAIVQAVTHYSDPQLLAEISCGLGEAMVGINLDDK
VERYANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagtggcgttgtaacagtttacggaaatggtgctttaacggaaacaactaag
caatccccgttttccgtaaaagtgggtcttgctcagatgcttcgtggcggcgttataatg
gacgtcgttaatgctgagcaggctcggatagccgaggaggccggcgcgtgcgctgtcatg
gctcttgagcgcgtccctgctgatatacgcgctcaaggcggcgttgcacgtatgtcggat
cctcaacttatcaaagaaatcaaacgggctgttactattccggttatggcgaaggctaga
attgggcattttgtggaggcgcagatacttgaggctattgggattgattacgttgatgaa
tcggaggtgttaaccttggcggatgatgagaatcatattaacaagcacaatttccgtatc
ccttttgtatgtggctgccgtaaccttggtgaggctctacgccgtatccgtgaaggcgca
gcgatgattcgtaccaaaggggaagcgggtactgggaacattattgaggctgttcgtcac
gtgcgttctgtgatgggtgatatcagggtgctccgcaacatggatgatgatgaggttttc
actttcgctaagaagattcaggcaccatatgatctggtgatgcagacgaagcaacttgga
aggcttcccgttgtccactttgcagcaggtggggtggcgacaccagcagatgcagcgctt
atgatgcagttgggatgtgatggggtgttcgttggttcggggattttcaagagtggtgac
cctgcaaagagaggacgtgctattgttcaagctgttactcattacagtgacccacaattg
ttggctgaaattagctgtgggcttggtgaggcaatggttggtattaatcttgatgataag
gtggagaggtatgctaatcgttctgagtga
DBGET
integrated database retrieval system