Capsicum annuum (peppers): 107875542
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Entry
107875542 CDS
T04646
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107875542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107875542
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107875542
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
U-box type E3
107875542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Arm_2
Neurochondrin
MLKL_N
zf-Nse
HEAT_EZ
KAP
zf-RING_UBOX
Nucleoporin_C
zf-C3HC4_4
MCAfunc
ArlS_N
Motif
Other DBs
NCBI-GeneID:
107875542
NCBI-ProteinID:
XP_016577785
LinkDB
All DBs
Position
6:complement(222542678..222549121)
Genome browser
AA seq
664 aa
AA seq
DB search
MEEERGVLVEKLINIVNEISGISEFRSSVKKEYCNLGRRLKLLIPMFEEIRDIKEQIPEE
SMKALVSLKEALELTKELLKFGSEGSKIYLVLEREQIMNKFHEVTTQLEQALGGVHYEEL
DISDEVKEQVELVLSQFQRAKGRVDTPDPELHEDLLSLYSNNNAAIDQAVLRQLVQKLQL
TRIYDLQQESCALHEMVTATGEDPEERIEKMSVILRKIKDFVLTETPEIDSSLREMSSTC
SGQASINTTHKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKTQ
QVLTSNAITPNYVLRSLIAQWCEVNGVEPPKRPGSLPSKSASVCTPAERSKIEILLRKLT
SGSPEDCLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNLS
ICEDNKRSIVISGAVPGIVHVLKKGSTEARENAAAALFSLSVIDENKVIIGTYGAIPPLV
TLLSDGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVLTLMELLTEPQGGMIDEALAILA
ILSSHPEGKTNIGAAGAVPVLVNVITNGSPRNKENAAAVLVHLCSGDQHHLVEVQELGVM
GPLLDLVQNGTERGKRKAIQLLERINRYAEQQKQAQTESEALINAQLHNQLSQSPPSSAN
ALDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaagaggagtgttagtggaaaagctgattaatatagtgaacgaaatatca
ggcatttcggaatttaggagttcagtgaagaaagagtattgcaatctaggtaggaggtta
aagttgttgattccaatgttcgaagagattcgggatatcaaagaacaaattcctgaagaa
tcgatgaaagctttggtttcgttgaaagaagcacttgaattgaccaaagaattgctcaaa
tttggtagtgaagggagcaagatttatctggtgttagaaagggagcagataatgaataaa
tttcacgaagtgacaacccagctagaacaagctttgggtggagttcattatgaagagctt
gacatatctgatgaagttaaagagcaggtagagcttgtcctttctcagttccaaagagcc
aaaggaagagttgatacacctgatcctgaactccatgaggatctattgtccctttacagc
aataataatgcggctatagatcaagctgtcctaaggcaattggttcagaaattacagctg
actagaatatatgatcttcaacaagaatcatgtgctttgcatgaaatggtcactgctact
ggtgaagatccagaggagaggatagagaagatgtcagtaatactgaggaaaattaaggac
tttgtgctgactgagactccggagattgattcttctttgagggagatgtcttcgacttgt
agtggacaagcatctatcaatacaactcataaggccccagtaataccagatgattttcgg
tgtcctatatccctggaactgatgaaagatcctgtcattgtttcatctggccagacttat
gagcgttcttctattgagaagtggctggaagcagggcatagcacttgtcccaagacacaa
caagtcctcacaagcaatgctatcacgccaaactatgtgttgcggagcctcatagcacag
tggtgtgaagtaaatggggttgaaccacccaaacgaccaggtagtttacccagtaagtca
gcatctgtgtgcacgcctgctgagcgctcaaagatagaaattctcctgagaaaactcaca
tctggcagccctgaagattgtctctcagccacaggcgaaatccgcctacttgctaagcgc
aatgctgataatcgtgttgcaatagctgaagcaggtgccattcctctgctcgtcgacctt
ctttccacacccgattctcgtatccaagagcatgctgttacagcactacttaacctctct
atttgtgaggataacaaacggagcattgtaatatcaggggcagtgcctggtatcgtccat
gtgcttaagaaggggagcacggaagcacgtgaaaatgcagcggccgcgctatttagcctt
tcagttatagatgaaaacaaggtcataattggtacctatggagcaatacctccgcttgtg
acattattaagtgatggcacccagagaggaaagaaagacgcagctactgcacttttcaat
ctgtgcatttatcaagggaacaagggcaaggcagtaagggctggagttgtgctcactctg
atggagctgcttacagaacctcaaggtggtatgatcgatgaagcgcttgccattttagcg
atattatctagtcatccagaagggaagacaaacattggagctgcaggggctgttcctgtt
ctggtaaatgtgataacaaatgggtctcccaggaacaaagaaaatgcagctgcagttctg
gtacacctctgctccggggaccaacatcatctagtggaggttcaggaactaggagtaatg
ggaccattgctggatttagtacaaaatggcaccgagaggggcaaacggaaggcaatccag
ttgcttgaacgaattaacagatatgctgagcagcaaaaacaggcccagacagaatccgag
gctctgattaatgctcaacttcataaccagctttcacagtcgcctccctcatcggcaaat
gccctggacagctga
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