Capsicum annuum (peppers): 107875590
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Entry
107875590 CDS
T04646
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cann03009
]
107875590
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
107875590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_15
RsgA_GTPase
AAA_28
AAA_22
AAA_16
AAA_24
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
107875590
NCBI-ProteinID:
XP_016577840
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Position
6:complement(220745225..220751335)
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AA seq
602 aa
AA seq
DB search
MVSDASKKREAQKKAAAAAKREGKSKAAAMKAAAAATAAPAESNSVDELTNGVGEIQLSD
RTCTGILCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLSA
IGCRELPIPDHMDIFHLTREIEASDMSSLQAVISCDEERLRLEKEVEVLAAQDDGGGEQL
ERIYERLEALDASTAEKRAAEILFGLGFNKKMQEQKTRDFSGGWRMRIALARALFMNPTI
LLLDEPTNHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKPYTGN
YDQYVQTRVELEENQMKMYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERG
GLTEKVVKDKVLVFRFPNVGKLPPPVLQFVDVTFGYTPDNLIYKNLDFGVDLDSRVALVG
PNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMELSALQFMIKEYPGN
EEEKMRASIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLDIET
IDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCENQTVTRWEGDIMDFKLHLKARAGL
GD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggatgcgagtaagaagagagaggcacagaagaaggcagctgcagctgcaaag
agagaagggaaatctaaggcggctgcgatgaaagcagcagcggctgcaacagctgctccg
gcagagagtaacagtgttgatgagttaacaaatggtgtaggagaaattcagttgtctgat
cggacttgtacgggtattttgtgttcacatccactttccagagatattcggatagaatct
ttatcacttactttccatggacatgatcttatagttgattctgaactggagctcaactat
ggaagacgttatggtttgcttgggcttaatggctgcgggaagtctactcttctttctgct
ataggatgccgtgaacttcccatcccagatcatatggatatctttcatctaacacgggag
attgaagcatctgacatgtcctcacttcaagctgttattagttgcgatgaagagaggttg
agattggaaaaagaagttgaagtcttggctgcacaggatgatggtggcggagagcaactt
gaacgcatctatgagcgtttggaagctttggacgcatcaactgctgagaagcgtgcagct
gaaatcttgtttggtcttggatttaacaagaaaatgcaagaacagaaaacacgagatttt
tctggtggctggaggatgaggattgctcttgctcgggccctgttcatgaatccgaccatt
ttgctgcttgatgaacccaccaatcatcttgacctagaggcttgcgtgtggttagaagaa
actttgaagaagtttgaccgtattctggttgttgtttcacactcgcaagattttctaaat
ggtgtgtgtactaacatcatccatatgcaaaataagaagttgaagccctacactggcaat
tatgatcaatatgtccaaactcgtgtggagctggaagagaatcagatgaaaatgtacaga
tgggagcaggagcagattgcttcaatgaaggagtacattgctcgttttggacacggatcg
gccaaactagcccgtcaagcacaaagcaaagagaaaacactggctaagatggagcgtgga
gggcttacagaaaaggtggtgaaggacaaggtccttgtcttccggtttcctaatgttggc
aaacttcctcctcctgttctgcagtttgtggatgtgacatttggttacacacccgataat
ctcatttacaagaatctagattttggtgtagaccttgattcaagggtggctctggtggga
cctaatggagctggaaagagcacactacttaagctgatgacaggggatttagttcccctt
gatggcatggttaggcggcataatcacctgcggattgcacagttccaccagcacctggct
gagaagcttgacatggaattatctgctcttcaattcatgataaaagagtatcctgggaat
gaggaggagaagatgagggcatcaatcgggaggtttggtcttactggtaaagctcaagta
atgcctatgaagaacttgtcagacggtcaacgtagccgggtaatatttgcgtggttagct
tttaggcaacctcacatgctgcttctggatgaaccaaccaaccatctcgatattgagaca
attgactcacttgcggaggctttgaatgaatgggacggtggcatggttctggttagtcat
gatttcaggctcataaaccaggttgcccatgagatatgggtatgtgaaaatcaaactgtg
acacggtgggagggtgacattatggacttcaagctacacttgaaggcgagggccggatta
ggtgattga
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