Capsicum annuum (peppers): 107875704
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Entry
107875704 CDS
T04646
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107875704
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cann00535
]
107875704
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
107875704
Meiosis-specific proteins
Cohesin complex and associated proteins
107875704
Proteoglycans [BR:
cann00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107875704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
107875704
NCBI-ProteinID:
XP_047269989
LinkDB
All DBs
Position
6:complement(218274209..>218287727)
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AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGYKSYKEQVKTEDFSPKVNCVVGANGSGKSNFFHAIRFVISDLFHNLRSEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIYDKELHDARQKLN
EVEEARNKVSENSTKMYESVLEAHEKSKELEKLSKDLTKEIQIFSKEKEAAEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMLLEREVQETKNALNDIKPLYEKQVKEEED
IKRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNLMQEKKLTDEI
DQLKNDMREQDEIIRVRKVEVDKKESLISGYRNAYNQYRVDRDKLHDERKSLWTQETKLT
TEIERLKAEVVKAEKSLDQATPGDIRRGLNSVRRICREYGISGVFGPIFELLECDDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKTPHVNYPQGSDVIPL
LKKLRFSDSYRKAFEQVFARTVICRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKEHELEEVRIKIQEIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDIGNAERQRQSILKALQKKEKLLGNIVSQIDQLRASIATKQDEMGTDLVDHLT
PEERDSLSRLNPEITTLKERLIACRANRIETETRKEELEMNLSTNLERRKQELVAMNSSV
DVDMLQSEVESKSQELKDADALVDHVTKELTRVSRSIDERNKRLKQIKQEKDNLKALEDK
YQNTLQDEARELEQLLSKRNTYLAKQEEYSKKIRELGPLSSDAFEMYKRRNIKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEEDDNDPDDDEPRADVEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYSVSHKNRVSKVAVVSREGALDFIEQDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcattatcgaagggtataagagttacaaggaacaagtaaagact
gaagatttcagtccaaaagttaactgtgttgttggtgcaaatggatctggcaagtctaat
tttttccatgccatccgtttcgtcataagcgatctctttcacaacctgcgcagtgaagaa
aggcaggctttgcttcatgaaggagcaggtcaccaagtattatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtgcggctgagaaga
acaatcggtctcaagaaggatgagtatttcttggatgggaaacatatcacgaagacagag
gtccaaaatttgctggaaagtgctgggttctctcgttccaatccctattatgttgtgcag
cagggaaagatagcatcattgacgttaatgaaagattcagaacgacttgatctgctcaag
gaaattggagggacacgtgtttatgaggagaggcggcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgtacaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactcaaaaagtatcaacagcttgacaagcagcgt
aaatcactggaatatacgatttatgacaaagaacttcatgatgcacgccagaaattgaat
gaggtagaagaggctcggaacaaagtttccgagaactctactaagatgtatgagagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagctgtccaaagatctgacaaaagaa
attcaaattttcagcaaggagaaagaagcagcagagaaacagcggacagaggctattaga
aagcgagcgaagcttgatctcgattacaaagaccttcaagagaagatgtctacgaatatt
aaagctaaagatgatgcacagaaacaactcatgcttctggagagagaagttcaggaaaca
aagaacgcactcaatgatatcaaacctttgtatgagaaacaagtaaaagaggaggaggac
atcaagagagggattatggatcgtgaaaagagacttagcatactttatcagaaacaaggc
cgtgccacacaatttgcgagcaaagctgctcgagataaatggcttcagaaagaaattgat
gaatatgagcgagttttatcttcaaacttaatgcaggagaaaaagcttacagatgaaatt
gatcagctcaaaaatgacatgagagaacaagatgagattatcagagttcgtaaagttgaa
gtcgacaaaaaggaatccctcatatctggttatcgaaatgcttataatcagtatagagtg
gatagagacaagctacatgatgagcggaagtccctgtggacacaggagactaagctgact
accgaaatcgaacggctcaaggctgaagttgtgaaggcagagaaaagcctagatcaggca
actcccggtgatatcagaaggggtctgaattccgttaggaggatctgcagagagtacgga
atatctggagtatttggcccaatttttgagttgcttgaatgtgacgataagttttttact
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcacaaaaaggtggacgagttacatttattcca
ttgaacagggttaaaactccacatgttaattatccacagggctctgatgtgattccgctt
ctgaagaaattgaggttttctgattcatatagaaaggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggatgttgccaccagggttgctcgtactgatgggcttgac
tgtatcactctggaaggtgaccaagttagtaaaaaaggtggcatgactggtggattttat
gatcacagacgctcaaaattaaggtttatgagcaccatcaaacagaatactgtttccatc
aacctgaaggagcatgaacttgaagaagttagaattaaaattcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcctgggtcacgacaagtct
gagttggaacagcttaaacaagacattggtaatgctgaaagacagagacaatctatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattgtgagtcaaatagatcagctc
agagctagtatagctacgaaacaagatgaaatgggaacagatcttgttgatcatttaaca
ccagaagagcgagattctttgtcacgtttgaatcctgaaatcacaactctgaaggagagg
ctgattgcatgccgagcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaaacaagagttggtggcaatgaattcttctgtc
gacgttgatatgctacagagtgaagttgagagcaagagtcaggaacttaaggatgcagat
gcactagttgaccatgtgactaaagagcttactagggtttctcgaagtatagatgaacga
aacaagaggctcaagcagatcaaacaggaaaaggataatctgaaggctcttgaagataag
tatcagaacacacttcaggatgaagcaagagaattggaacagctactaagtaaacggaac
acctatcttgccaagcaagaagaatactcgaagaaaattcgggaactgggtcctctatct
tctgatgcctttgagatgtacaaaagaaggaatataaaagaattatataagatgctgcac
aagtgtaatgagcagctgcagcagttcagccatgtaaacaaaaaggcacttgatcaatat
gtaaatttcaccgagcaaagagaagaactccaaagaaggcaagctgaactggatgctggg
gatgagaaaatcaaggagcttatatctgttttggatatgaggaaggatgaatcaattgag
cgcacattcaagggcgtggctaaacatttccgtgaagtattctctcaacttgtgcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggaggatgacaatgatcct
gatgatgatgagccacgtgctgatgtggagggaagagttgagaaatatattggtgtgaaa
gtgaaggtgtccttcaccggacaaggagaaacacagtcaatgaaacagttatcaggtggc
cagaaaactgtggtagcgctggcacttatatttgccattcaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacagctgtggga
aatatggttcgtgatttagccgacaggggtagcacgcaatttatcacgacgacatttcgc
ccggagctcgtgaaagttgctgataagatatatagtgtgagtcacaaaaatagagttagc
aaagtggctgttgtgtccagggaaggagccttagattttattgagcaggatcaatctcat
aactga
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