Capsicum annuum (peppers): 107875781
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Entry
107875781 CDS
T04646
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107875781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cann04131
]
107875781
03029 Mitochondrial biogenesis [BR:
cann03029
]
107875781
Membrane trafficking [BR:
cann04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107875781
Atg1 complex
107875781
Mitochondrial biogenesis [BR:
cann03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107875781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107875781
NCBI-ProteinID:
XP_016578104
LinkDB
All DBs
Position
6:complement(216607354..216613104)
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AA seq
606 aa
AA seq
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MDFQSNPQGEHGRFEQILAQFLLKSLHIILDSRVPSIRPYGEIGEVKKSDKWFNLVLGDR
PVVLDNLNLLHRNLMEPIIIDIILVQDKPSTLSKHNSGTTFAGTYTETVIERWVVQCENR
RSMVPHMGDSSFKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSLSSQSCSFDINFKVSSF
IEPFSRAEEEMMKQYTFTSVDAQQGRLSLSVTYRENLMDFNLDTSASFPPEIITDYVGSP
LTDPMRSFPLISMDKGVHHTSFPLRRTQSSSSAPQRPQSWTSGLFRAPSLPQPYVGSPPL
YHAPYELSSSVSDVYEQKVPPNYKFPGHRKVTSFGDDLLSPPFSPSPSPSPSPSSPSYLS
GANLVQARLRPETGPVPIPHPLIGRTSRHLSPNLSDPNRHYLPPMSPRTSHESPSGIRTS
RKMDLLRAPEPDTGTTNPGQKLSTDARDDSGRFSGVLSSSDSPRVGFSRSSSSRLSFQDD
LDDCDFSCPFIVDDVDTSDSRARETLESRKGSEAPSQVSATTKKSQDAAVGALVYMLRTA
PPLRQDSTCYTTHPVKPEIEGEAGTASQSYVPRKASDALEELKAYTQLKDTLLPKSTTHS
SSEGET
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaacccacagggtgaacatggaagatttgagcaaatacttgctcaa
tttcttctgaaaagcttgcatattattttggactcaagggttccttcgatacgaccttat
ggtgagattggagaagtgaagaagagtgacaagtggttcaatttggtgttgggagatcgt
cctgttgttcttgataacttgaatttgttgcacagaaatttgatggaaccaataataata
gatataatactcgttcaagataagcctagtactttatctaagcacaattcaggcacaaca
tttgcagggacatatactgaaaccgttatagagaggtgggtggtgcaatgtgagaatagg
aggtcgatggttcctcacatgggtgattcctctttcaagaaaacatacaagaagtctatc
atactcctccgttccctttattcaatgatgaggctcctgcctgcattcaaggccttcagg
aaactgtctttgtcgagtcagagctgttcttttgatattaattttaaggtatcttcattt
attgaaccattctcaagggcagaggaggagatgatgaagcaatatacttttacttcagtt
gatgcccagcaaggccggctttctttatctgtgacatatcgtgaaaatctgatggacttc
aacctggacacttctgcatcctttcctcctgagatcattacagattatgttggtagtccg
ctcactgatcctatgaggtcattccctttaatttcaatggataagggtgttcatcatact
tcatttccattgagaaggacacagtcatcttcttcagcacctcagcgcccgcagagttgg
acaagtggtctcttcagggcaccttctttacctcagccatatgtaggatctccaccttta
taccatgcaccatatgaactttcaagttcagtcagcgatgtatatgaacagaaggttcca
cctaactacaaatttcccggtcacaggaaagtaactagttttggtgatgacctgctttcc
cctccattttcaccatctccatctccatccccatctccttcttcaccctcatatctctca
ggtgcaaatctcgtgcaggctcgtttgcgtccagaaactggtcccgttcccatccctcat
ccattgataggcagaacttccagacacctatctcctaatttgtctgatccaaacaggcat
tatctcccacccatgtcacctagaacatcccatgaatccccttctggaattaggacatca
aggaaaatggatttgctgagggctccagagccagatactgggactactaatcctggacaa
aagttgtctacagatgctagagacgattcagggcggttctcaggtgtgctatcttcaagt
gattcaccacgtgttggattttctagaagttctagcagcagattgtcttttcaggatgac
ttggatgattgtgatttttcctgtccttttatagttgatgatgtagatacttctgattcc
agagccagagagacccttgaatccagaaaaggttcagaagccccgtctcaagtatctgcg
acaaccaaaaaatctcaagacgctgctgtaggcgcccttgtttacatgctgaggactgct
ccccctctgcgtcaagattctacctgttacaccacacatcctgtaaagccagaaatagag
ggagaagcaggcactgcatctcagtcctatgttcctaggaaggcatcggatgctttggag
gagctcaaagcttacacacaattgaaagatacgttacttcccaagagcacgacccactca
agcagtgagggtgaaacttaa
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