Capsicum annuum (peppers): 107876036
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Entry
107876036 CDS
T04646
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107876036
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cann01002
]
107876036
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107876036
03036 Chromosome and associated proteins [BR:
cann03036
]
107876036
03400 DNA repair and recombination proteins [BR:
cann03400
]
107876036
Peptidases and inhibitors [BR:
cann01002
]
Metallo peptidases
Family M67
107876036
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107876036
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107876036
BRISC complex
107876036
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
107876036
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107876036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
107876036
NCBI-ProteinID:
XP_016578501
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All DBs
Position
6:complement(204645688..204654433)
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AA seq
419 aa
AA seq
DB search
MSLTSVKMTEEVWLTCLSHALSTETEEIMGLLLGDTQQSKNGSVTALIWAALPQPRCDRR
KDRVETNPEQLTAASVKAERMTMATGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
AGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKQQNHILRPISLSPVHKTSVIDLESSLSS
ADTSIGGSKISSLEQDTGDSRAAALVSKGGARSTDLGNFFANVDNRVGESLHANSLSNAI
IDVDPMDMSESMQEAMHRSNLEMSGAEYVRKEIPLLVLPSSSLFNLDAPLNSFTDLQRVL
FEEERTAYNQAVLANMREGKVHPLTFIHHTSTYQASMCKLMEYCLSPAISALQDQLRENE
IRLKMLSEEAKVLESEIVRGEPNTSSPRRGSASSGQRDLYSPTELRSVSGSSSRSRKAS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaagtgtgaaaatgacggaggaagtttggttaacttgtttaagtcatgca
ttgtctactgaaactgaagaaataatgggtcttctcctcggtgacactcagcaatcaaaa
aatggtagtgtgactgcacttatatgggcagcgctgccacagccacgttgtgacaggagg
aaggaccgcgttgagaccaatcctgagcaactaactgctgcatcagtcaaggctgagaga
atgaccatggcaacaggaagaacaacaagagtgattggctggtaccactcgcatccccac
atcacagtgctcccttcccatgttgatgtccgcactcaagccatgtatcaacttctggat
gctgggtttattgggttgatattttcatgttttagtgaagatgcacagaaggtggggaga
atacaagttattgcatttcagtccttggatggaaagcagcagaatcacattttgaggcct
atttctctttcccctgtacataaaacttctgtaatagaccttgaatcctctttaagttcc
gcagacacatctataggtggttcaaaaatctcgagtcttgaacaagatactggtgattcg
agagctgctgctttagtttctaagggtggggcaagatctacggacttgggcaatttcttt
gctaatgttgataatagggttggagaaagccttcacgccaacagtcttagtaatgcaatc
attgatgtagatccaatggacatgtcagagagtatgcaagaagcaatgcatcgatcaaat
ctggagatgagtggtgcggaatatgtgagaaaggaaatccctcttcttgttctgccatcc
tcgtctcttttcaatcttgatgcacctttgaactcattcacagatctgcaacgcgtatta
tttgaagaagaacgaactgcatataatcaggctgttctagcaaatatgagggaaggaaaa
gtgcacccactcactttcattcatcacacatccacataccaggcctctatgtgcaaatta
atggagtattgcttaagtcctgccatcagtgcccttcaagaccagttgagagagaatgaa
attcggctaaagatgttaagtgaagaagccaaggttttggaatcggagatcgtgagaggg
gaaccaaatacaagttctcctcgtcgaggtagtgcttcatcgggtcaaagagacttgtac
agtccaactgagttgagaagtgtttccggttcaagtagccggagcagaaaagcatcgtag
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