Capsicum annuum (peppers): 107877557
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Entry
107877557 CDS
T04646
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03030
DNA replication
cann03410
Base excision repair
cann03420
Nucleotide excision repair
cann03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107877557
03410 Base excision repair
107877557
03420 Nucleotide excision repair
107877557
03430 Mismatch repair
107877557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cann03032
]
107877557
03400 DNA repair and recombination proteins [BR:
cann03400
]
107877557
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107877557
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107877557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
RCF1-5-like_lid
AAA_30
PTCB-BRCT
AAA_22
AAA_19
AAA_5
RuvB_N
AAA_assoc_2
AAA_14
BRCT_2
Gp44_lid
nSTAND3
AAA_18
AAA_16
NTPase_1
DNAX_ATPase_lid
Sigma54_activ_2
KTI12
Zeta_toxin
RsgA_GTPase
SurA_N
Motif
Other DBs
NCBI-GeneID:
107877557
NCBI-ProteinID:
XP_016579711
LinkDB
All DBs
Position
7:complement(2672411..2688350)
Genome browser
AA seq
1015 aa
AA seq
DB search
MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSPATPKAESLVQEGQETAGRRKTSKYFATD
KVKPKEEKVEEVSAKRKAQNDGGSSSANEKPPAAKRIHKAEDDDDFVLPSSATGSRDVTP
SKRLVSGSGRGSARKNVISDDSDDDLKSKKSDVKPAGRGRGGRAAQTGGKRAPLDESDDD
ASAVKDTKSGGRGRGGKAPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPD
CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSRKTNYLLCDEDIEGRKSSKAKEL
GTAFLTEDGLFEMIRSSNKSKSATQPESKKSLDTVVSSPKRKLQNTSDGTGSTAAKILAA
KQLASSASPAKSSASPAKGSASPAKRKSQVKESLLPWTEKYRPKAIVDIIGNKSLVEQIQ
RWLESWDEHFLKAASKGKGKKQNDSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVN
ASDSRGKADSKIEKGIGGSTANSIKELVSNESLSANIGRSHHQKTVLIMDEVDGMSAGDR
GGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAE
GIQVNEIALEELADRVGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKA
IEKLFDFNAKNLKIDQRIDLSMSDPDLVPLLVQENYLNYKPSSAGKDDSDLKRMSLIACA
ADSIANSDLINVQIRRYQQWQLSPAGCISSCIIPASLLHGQRQTLEQGERNFNRFGGWLG
KNSTMGKNYRILEDLHVHLLASRESYLGRANLRLDYFTLLGKKLTDPLRVLPKDEAVENV
VDFMDSYSISQDDFDNIVEISKFKGCLTLLDGVQPAVKAALTKAYNKGSKSRVIRTADLI
TLPGIKKAPKKRVAAMLEPLDEGVAAEENDETLAEDEENSSETEDTADVEKKLQSDLQSL
SSKGIQVNMDLKGGKKPSAGRGRGRGSSNSSDKGSAESSGKRGGRGSGAAAKRKR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcaggaaatggttcatgaagcagcatgacaaaggcaccggtaatgggagt
atgtccaagaatagtgcagcagaaaagccttccccagctactccaaaggcagaaagcctg
gtacaagaaggacaagagactgccggcagaaggaaaactagtaaatattttgctacagac
aaggtgaagccaaaagaagaaaaagttgaggaagtgtcagcaaaaagaaaagctcaaaat
gatggtggaagttcatcagctaatgagaagccaccagctgcaaaaagaattcacaaagct
gaggatgatgacgactttgtactgccttcatctgcaacgggatccagagatgtcactccc
agcaaaaggttggtaagtggctctggaaggggatctgcgcggaaaaatgtgatcagtgat
gatagtgacgatgatcttaagagcaaaaagtctgatgtcaaacctgctggaagagggcgt
ggtggacgggcagctcagaccggtggaaagcgcgcccctcttgatgaaagtgatgatgat
gcctcagctgtcaaggacaccaaatctggtggacgagggcgtggtggtaaagcaccatct
gcagcaccaagtggtggacgaggcagaggtggtggaggacgaggaggtttcatgaatttc
ggtgaaagaaaagaccctcctcacaagggggaaaaggaagttcctgaaggtgccccagat
tgtttagctggtttgacttttgtaattagtggaactcttgacagtttagaaagagaagaa
gctgaggatttgattaaacgccatggtggtcgcgtcacaggatctgttagcaggaaaacg
aattatcttttatgtgatgaagacatcgagggaaggaaatcctctaaagccaaggagctc
ggaactgcatttctcactgaggatggtttgtttgaaatgatccggtcatccaataaatca
aaatcagctacccaaccagagtcaaagaaatctctggacactgttgtttcttctccaaag
agaaagttacaaaatacaagtgatggaactggaagcactgccgcgaagattctagctgcc
aaacaattggcatctagtgcatctcctgctaaaagtagtgcatctcctgcgaagggtagt
gcatctcctgccaagaggaaaagccaagttaaagagtctttactaccatggacagaaaaa
tacaggcccaaagctattgttgacataataggaaataagtcactggtggaacagattcaa
cgttggctagagagctgggatgagcatttcctaaaagcagctagtaaggggaagggaaaa
aaacagaatgactctggtgctaaaaaagcagttctgctgagtggtatgccaggtataggg
aagactacatcagcaaaggtggttagtcagttgcttggtttccaaaccattgaggtaaat
gctagtgatagtcgtggaaaggctgattcaaaaattgagaaaggaattggtggaagtact
gctaattccataaaagaacttgttagcaatgaatctctaagtgctaatattggcagatca
caccatcagaagactgttctgattatggacgaggttgatggcatgtctgctggagataga
ggaggcgttgccgatcttattgctagcatcaagatctcaaaaattcctattatctgcatt
tgcaatgatcgctacagtcagaaattgaagagccttgtcaattattgccttccaattgtc
ttcagaaaaccaaccaagcagcagatggcaaagaggttaaagcaagtggcaaatgctgaa
ggcattcaagtcaatgagattgctcttgaggaattggcagaccgtgttggtggagatatg
cgtatggctctaaatcaattgcaatacatgagtctctccaaatctgtgatccaatacgat
gatataagacagcgccttctaagcagttcaaaggatgaggatatctcaccgttcaaagct
atagaaaagctgtttgattttaatgccaagaacttaaagatagatcaaagaattgaccta
agtatgagtgacccagatcttgtcccgcttcttgtccaggagaactacctcaattacaaa
ccaagttctgctggcaaagatgatagtgacttaaagcggatgagcctaattgcatgtgct
gcagactctattgcgaatagtgacttaataaatgtacaaattcgaagataccagcagtgg
caactttctccagctggttgcatttcatcttgcataattcctgcttctttgttgcacgga
cagaggcagactcttgagcagggagaacgcaactttaacaggtttggtggctggctaggt
aagaactctacaatgggaaagaattatcgaattctggaggacttgcatgttcacctactc
gcatctcgtgaatcttatttgggaagggcaaacctgagactggactactttactcttctt
ggaaagaagttgactgatccattaagagtgctgcctaaggatgaagctgtagagaatgtt
gtggatttcatggattcatactctataagccaggatgactttgataatattgtggagatc
tcaaaattcaagggatgtctgactcttctggatggtgttcagcctgctgtgaaagctgca
ctgacaaaggcatacaacaaaggaagtaaatcacgtgttattcgcacagcagatttaatt
acccttcctggaattaaaaaagctcccaagaagcgcgttgcagcgatgcttgagccacta
gacgaaggcgtagctgctgaagaaaatgacgaaacacttgctgaagatgaagagaactca
tcagagacagaagacacggcagatgttgagaaaaaattgcagtcagatcttcagagtctc
agttcgaaaggaatccaagtaaacatggacttgaagggtggcaagaagccttctgcagga
agaggacgaggaagaggaagttctaatagcagtgataaaggaagcgctgaatcctcaggt
aagagaggtggccgaggttctggagctgctgccaagcgaaaaagatga
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