Capsicum annuum (peppers): 107877713
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Entry
107877713 CDS
T04646
Name
(RefSeq) RING-H2 finger protein ATL43
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107877713
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107877713
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107877713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_1
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8_fungal
zf-RING-like
PHD
Motif
Other DBs
NCBI-GeneID:
107877713
NCBI-ProteinID:
XP_016579896
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All DBs
Position
7:11837608..11839710
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AA seq
428 aa
AA seq
DB search
MGIFNVHLLFLLFFFFFVTVIATTSYAEIAPPPPPPPPPAPNRSRDSPFRPSIAIVIAIL
TTILSITFLLLLYAKHCKKGPFGTMATASGISSGNTLHSSSFRKNSGIDRKVIESLPIFR
FGSLRGQKAVEGLECAVCLNKFEPSEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYQV
HPEDILLISHTTSERKSTSSVSSSPIKEKSASSTCIRHSSAGERGTCSSSSLQIIVETPR
QQERPSFLNRRMSLDSWNFHRKKSKSTNTCSISSLARKDGMLLLNNNHKDPGERRLEHRI
IISGDHEPPPPLASTLPQGTAAQYRWSDVEACDMLYLRSEMILSDSRRYSGSRKRRDEIE
GGEGSGRRVINERSVSEMTGMSRFRSNEERERERKGAVKRWLDWISQSQNKSVSVSAVAA
SSSTSATS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggcattttcaatgttcatttacttttcctccttttcttcttcttcttcgttactgtc
atagctacaacaagttatgcagaaattgctccacctccaccaccaccaccgccaccagca
ccaaatagatctcgagattccccattccggcctagcatagcaatagtaatagccattctc
acaacaattttgtcgatcacattcttgttgctgttatacgcaaagcattgtaagaagggt
cctttcggaaccatggccactgcctccggcatctccagtggcaacactctgcattcgtct
agcttcaggaaaaactcaggcattgataggaaggtcattgaatccttacccattttccgg
tttggttcacttagaggacagaaagctgttgaaggacttgaatgtgctgtttgcttgaat
aaattcgaaccaagtgaaattctcaggttgttacctaaatgtaaacacgcatttcacgtt
gagtgtgtggatacttggctcgacgctcactctacttgtcctctgtgtcgttatcaagtt
catcctgaagacattcttcttatctcacacaccacttctgagagaaaatctacttcgtcc
gtgtcctcctcccctataaaagaaaaatctgcttcttcgacttgcattagacactcttca
gctggagaacgaggtacatgctcgtcatcttcattgcagataattgtggagacaccaaga
caacaggagaggccgtcttttcttaacaggagaatgtcattggacagttggaatttccac
aggaagaaaagcaagtccacaaacacttgctccatttcatctttagcaagaaaagacgga
atgttgctgttgaataacaatcacaaggatccaggagaacggcggctggagcaccggata
ataatatccggtgatcatgagccgccgccgccgttggccagtacgctgccccaggggact
gcggcacagtacaggtggagtgatgtggaggcctgtgatatgttgtatttgcggtcagag
atgatattgagcgacagccgtagatattcggggtcgagaaaacggagggatgagattgaa
ggaggagaggggagtggcagaagagtaataaatgagagaagtgtgtctgaaatgacaggg
atgagtaggtttagaagtaatgaagaaagagaaagagaaaggaaaggagcagtaaaaaga
tggttagattggatttcccaatcacaaaataaatctgtgtctgtgtctgctgttgcagct
tcttcttctacttctgctacctcatga
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