Capsicum annuum (peppers): 107877765
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Entry
107877765 CDS
T04646
Name
(RefSeq) nuclear pore complex protein NUP155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107877765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107877765
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107877765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
107877765
NCBI-ProteinID:
XP_016579958
LinkDB
All DBs
Position
7:complement(27600383..27622544)
Genome browser
AA seq
1479 aa
AA seq
DB search
MSGDNEIVMRDVTNAGLVVSDRIGRDVSLRIDLEDALEASRYASHPYTAQPREWPPLVEV
VDSWELPAVLIERYNASSGEGTALCGIFPEIRRAWASVDNTLFLWRFDKWDGHCPEYSGD
EQAICVVGLAKVKPGIFVEAIQYLLILATPVELILVGVCCSASSDGTDPYAEVSLQPLPD
YTIPSDGVTMTCISSTDKGHIFLAGRDGHIYELQYSTGSGWQKRCRKLSLTAGFGSVISR
WVVPNVFKFGAVDPIVEMVIDNERHILYARTEEMKIQMFSLGENGDGPLKKVAEERNLIN
QRDSYGGRQPAGSRAPRSAKTTIVSIAPLSLLESKWLHLVAVLSDGRRMYLSTSSSGGNN
STAGNFGGLNHQKPNCLKVVTTRPAPPLGAGSGLPFGAVSLASRSQSEDMSLKIESAYYS
AGTLVLSDSSPSTVSSLLIVNRDSSAQSSSSSLGAGARSSRPLRELVSSLPIEGRMLFVA
DVLPLPDTAAAVQSLYLQLEFCGYDNSGESCERTSGKLWARGDLSTQHILPRRRIVIFST
MGMMEVVFNRPVDLLRRLLESNSPRSLLEDFFSRFGSGESAAMCLMLGARIIYTETLVSN
VAAERAAEAYEDPRLVGVPQLEGTGAFSNTRAPAGGFSMGQVVQEAEPVFSGAHEGLCLC
SSRLLLPLWELPVFISKGSIASSNTFDNVVIVCRLPGESMQILEDKIRSLEKFLRSRRNQ
RRGLYGCVSGLGDLTGSILIGTGSDMGAGDRSMVRNLFGSYARNVESNEGGSSNKRRRLP
YSSAELAAMEVRAMECIRQLLLRCGEALFLLQLLAQHHVTRLIQNFDANIKQALVQLTFR
QLVCSEEGDRLAMRLVSALMEHYTGPDGRGTVDDISGRLRDGCPSYYKESDYKFYLAVES
LERAAATLDAGERENLAKEAFSYLSKVPESADLQTVCKRFEDLRFYEAVVLLPLQKAQAL
DPAGDAFNEQIDSGIRELALAQREQCYEIISSALHSLKGEASKRGFGSPIRPIAQSTLDQ
TSRKKFIRQIVQLGVQSSDRVFHQHLYQTLIDLGLEDELLEYGGPDLVPFLQNSGREPTD
EVHAASSVASPTSPLAHARVPAPANQAKYFELLARYYVLKRQHVLAAHVLVRLAERRSTD
AGDAPPLEQRRQYLSNAVLQAKNAHDTDGMSGSARGALDNGLLDLLEGKLAVLQFQIKIK
DELEAMASRLEASTSTSESGSGETSPDMSNILREKAKELSMELKSITQLYNDYAVPFEIW
ELCLEMLYFASYSGDADSSIVRETWARLIDQALMRGGIAEACAVLKRVGSHVYPGDGAVL
PFDTLCLHLEKAALEQVVSGAESVGDEDIPRALLAACKGAVEPVLNTYDQLLSSGAVLPT
PNLRLRLLRSVLALLREWALSVFAQGMGTSVTGASLILDGTLSLGQNTVVNQGVRDKITS
AANRYMTEVRRLPLPQNQTEAVYRGFRELEESLLSPFPF
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggacaatgagattgtgatgcgtgacgttaccaatgcaggacttgtagttagt
gaccgcattggccgtgatgtttctttgcgaattgatcttgaagacgccttggaagcttct
agatatgccagtcatccctatactgctcaaccccgtgagtggcctcctttagtggaagtc
gtggattcttgggagttgccagctgtattgattgagagatataatgcatccagcggagaa
ggaactgcattatgtggaatatttcctgaaatacgtagagcttgggcatcggtggacaac
acattgtttctttggcggttcgataagtgggatggccactgtcctgaatatagcggagat
gaacaagctatatgcgttgttggcctagccaaagtcaaacctggaattttcgtggaggcc
atccagtatcttctgatcttggcaactcctgttgagttgatccttgtaggtgtatgttgt
tctgcaagcagtgatggaactgatccatatgctgaagtctcacttcagccattaccagat
tatacaattccatctgatggagtgaccatgacatgtatcagttccacagacaaaggtcac
attttccttgcggggcgtgatggccacatttatgaattgcagtactcaactggttcgggg
tggcagaaacgatgccgcaagctcagcctaactgcaggtttcggaagtgttatatctagg
tgggtggtgccaaatgttttcaagtttggagccgtagaccccattgttgaaatggtcatt
gataatgagagacacatcttatatgcacgtactgaagagatgaaaattcaaatgttttcc
cttggagaaaatggggatggaccccttaaaaaggtagcagaagagagaaatttgataaat
cagagggattcttatggtggtaggcaaccagctggttcaagggctcctagatcagccaaa
acaaccattgtttccatcgcaccgttatctctcttagaatcgaagtggctacaccttgtt
gccgttctatcagatggcagaaggatgtatctttccacctcttcttctggcggaaacaat
agtactgctggaaattttggtggccttaaccatcagaagccaaactgcttaaaagttgta
acgaccaggccagctcctcctctaggggcaggtagtgggcttccatttggagctgtatct
cttgctagtagatcacagagtgaagatatgtcactgaagatagaatcagcctattattct
gctgggacccttgtcctttctgattcatctccatcaactgtttcttctcttcttattgta
aatcgggattcaagtgctcaatcttcttcaagtagcttgggagcaggtgctaggagttcc
cgcccactccgtgaattggtgtcatccctgcccattgaaggaaggatgctttttgtggca
gatgttctacccctaccagatacagcagctgcggtgcaatcactttatttacagctggag
ttctgtggatatgataactcaggggaatcctgtgaaagaacttcaggtaaactttgggct
agaggtgatctttcaacccaacatatattaccaaggaggagaattgtcatattcagcact
atgggtatgatggaagtagtttttaacagaccagtcgatttactcaggagactattggaa
tccaattcgcctaggtcattattagaggatttcttcagtcgttttggatctggagagtcc
gctgccatgtgtttaatgcttggtgcgaggataatctatactgagaccttagtaagtaat
gttgctgctgagagggcagctgaagcatatgaagatccaagacttgttggagtaccacag
ctagaaggtactggtgcattttcaaatactagagctccagctggaggatttagcatgggc
caggttgtgcaggaagctgagcctgttttttccggtgctcatgaaggtctttgcttgtgc
tcatcaagattacttctacctttgtgggagcttcctgttttcatctcgaaaggaagcata
gcttcttcaaacacatttgacaatgtagtaattgtctgccgacttcctggtgagtcaatg
caaatcctggaagacaagatacgttctttggagaagttcctgagatctaggaggaatcag
agaaggggactttatggttgtgtttctggcctaggtgacttgacaggctcaattttgatt
ggaactggctcggatatgggggctggtgacagaagtatggtaagaaatctatttggatct
tatgctcgcaatgttgagtccaatgaaggtggatcatcaaacaaaaggcgacgacttcct
tatagttctgcagaacttgctgccatggaggttagagcaatggagtgtataaggcaatta
ctccttagatgtggcgaggccctatttttgctgcaacttcttgcacaacatcatgtgaca
cgcttgattcagaattttgatgcaaatatcaagcaagccctagttcagctgacattccgt
caactagtttgttcagaagagggagatagacttgctatgagacttgtatctgcccttatg
gagcattacactggtccagatggaaggggaactgttgacgacataagtggtagattacga
gatggttgtccaagttattacaaagagtccgattacaagttctacttagcagttgaatct
cttgaaagagcagctgctacattagatgcaggtgagagagagaaccttgcgaaagaggca
ttcagttacctaagcaaagttccagagtctgcagatctgcagactgtatgtaaacgtttt
gaagatctaagattttatgaagccgtggtcctattacctctgcaaaaggcacaagctctt
gaccctgctggtgatgctttcaatgagcaaatagattctggaattcgagagcttgcactt
gctcaacgcgagcagtgctatgagattatttctagtgctttgcattccttaaaaggtgaa
gcttcaaaaaggggatttggatctcctatcagaccaattgctcaatctactcttgatcaa
acttctaggaaaaagtttatacgccagattgtccaacttggtgtgcaatcttcagacaga
gtttttcatcagcatttatatcaaactttaattgatttgggcctggaagatgaactactg
gaatatggtggccccgatttggttccttttctgcaaaattcaggtcgtgaaccaacagat
gaggttcatgctgcctcttcagtggcatctccaacttcaccattagctcatgctagagtc
cctgcaccagccaaccaagcaaagtattttgagcttttggctcgttattatgttttgaag
cggcagcatgttcttgcagctcatgttttggtgaggctagcagaaaggcgctccactgat
gcaggggatgctcctcctttagagcaaaggcggcaatacttgagtaatgctgttttgcaa
gcaaagaatgcccatgacacggatggtatgagtggttctgcccggggcgcccttgacaat
gggctgcttgatttgcttgaaggaaagcttgctgttcttcaatttcaaataaaaattaaa
gatgaactggaggccatggcttctaggttagaggcatctacaagcacatctgaatctggt
tccggagaaacatcacctgatatgagtaacattcttcgagaaaaagccaaggagttatca
atggaattgaagagcattactcagctgtataatgactatgctgttccttttgagatatgg
gagttatgtctggagatgttgtatttcgctagctactctggtgatgctgatagcagcata
gtgcgagaaacttgggctaggctcattgatcaagctcttatgagaggtgggattgctgaa
gcttgtgctgtactgaagagggttggttcccatgtgtatcccggagatggagctgtttta
ccattcgatactctttgtcttcaccttgagaaggctgcgctggagcaagtggtttctggt
gctgaatctgttggagatgaagatattcctagggctcttttagctgcttgcaagggtgca
gtagagcctgtattaaatacttatgaccagctgttatccagtggagcagtgttgccaact
ccaaatcttagattgcgtctcctgcgttccgtgctggctttacttcgtgaatgggcactt
tctgtcttcgcacagggaatgggtacaagtgttactggagcctctctgattcttgatgga
actttatcattaggacagaacactgttgttaatcaaggtgttcgcgataaaattacaagt
gcagcaaatcgatatatgacagaagtgcgaagattaccgcttccacaaaatcagactgaa
gccgtctatcgaggttttcgtgaacttgaagaatcattgttaagtccgttccctttttaa
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