KEGG   Capsicum annuum (peppers): 107877803
Entry
107877803         CDS       T04646                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4
  KO
K10752  histone-binding protein RBBP4
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03082  ATP-dependent chromatin remodeling
cann03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107877803
   03083 Polycomb repressive complex
    107877803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107877803
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     107877803
  Histone modification proteins
   HAT complexes
    HATB complex
     107877803
   HDAC complexes
    Sin3A-HDAC complex
     107877803
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     107877803
    PRC2.2
     107877803
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     107877803
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107877803
  Chromatin remodeling factors
   NuRD complex
    107877803
   NuRF complex
    107877803
   NuRF complex (fruit fly)
    107877803
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz CAF1C_H4-bd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd WD40_RFWD3 eIF2A Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Ge1_WD40
Other DBs
NCBI-GeneID: 107877803
NCBI-ProteinID: XP_016580014
LinkDB
Position
7:166891446..166912051
AA seq 490 aa
METPSSHPKRRGRPKGSSTKSKEERGEKEPHSSGRLRGKAAAAVDEKYVQWKSLVPVLYD
WFANHNLVWPSLSCRWGPIVEQGSLKNRQRLYLSEQTDKSVPNTLIIANCDVVKPRVASE
DHIANFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHTDGPEVLIWDIEAQPNK
HAVYGAAASRPDLVLSGHQDNAEFALALCPMEPFVLSGGKDKTVVLWSIEDHISTLAADA
PKSGGSGGSIIKCADNPSIEPRGIFQGHEDTVEDVQFCPSSSQEFCSVGDDSCLILWDAR
VGNNPVVKVEKAHDADLHCVDWNPHNDNLIITGSADNSVRLFDRRNLTSDGVGSPVHMFE
QHTAAVLCAQWCPDRSSVFGSSAEDGLLNIWDYEKVGETKDTEAKSEDDSPPGLFFQHAG
HRDKIVDFHWNASDPWTIVSVSDDLETSGGGGTLQIWRMSDLLYRPEEDVLSELQQFKDH
VSKCAPKFKG
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggaaacgccttcttcccatccaaaaaggcgtggcaggccaaagggttcttctaccaaa
tcgaaagaggaaagaggagaaaaggaacctcacagtagcggcaggctgagaggtaaagct
gctgctgctgtcgacgagaaatatgttcagtggaagtcactcgttcccgtactctatgac
tggttcgctaatcacaacctcgtttggccttccctctcttgcaggtggggtccaatagtt
gagcagggttctttgaaaaaccgccagcgactctacctctccgaacagacggataagtca
gtgcctaatactttgatcatcgccaattgtgatgtggttaagcccagggttgcatcggaa
gatcacattgcaaatttcaatgaagaggcacgctcgccatttgtgaagaagtacaaaacc
ataatacatccgggagaggttaacagaatcagagaactcccacagaacaaaaacatagtg
gcgacccataccgatggtcctgaagttctcatttgggacattgaagctcagcctaacaag
catgctgtctatggtgctgctgcttcgcgtccagatctggtattaagtggacatcaggac
aatgcagaatttgctctggctctgtgccccatggaaccctttgtcctctctggaggaaag
gacaaaactgtggtcttgtggagcattgaagaccacatttcaacattggcagcagatgcg
cccaagtctggaggatctggtggctctataattaagtgtgctgataatccttccattgaa
ccacgtggtatcttccagggccatgaggatactgttgaagatgttcagttttgcccttca
agttcgcaggaattctgtagtgttggtgatgattcatgcctcatattatgggacgctcga
gttggtaacaatcctgttgtaaaggttgagaaagcgcatgatgctgatcttcattgtgtc
gactggaatcctcacaatgacaatcttatcataaccgggtctgctgataactcggtacgc
ttgtttgaccggcgaaatttgacttcagatggggttggatctccggtacatatgtttgaa
cagcacacagctgcagttctctgtgctcagtggtgtccggataggtcttctgtgtttggg
agctctgcagaagatggcctcttaaatatttgggactatgagaaggttggtgaaacaaaa
gatactgaagctaaatctgaagatgattctcctccagggttattttttcagcatgctggc
cacagggataaaattgtggactttcactggaatgcatcagatccatggactattgttagt
gtatctgatgacttggagacctctggtggaggcggcactctacagatatggcgcatgagt
gatttattgtaccgtccggaggaggatgttttgtctgagctgcaacagttcaaggaccat
gtgagcaagtgtgctcccaagttcaaaggctga

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