Capsicum annuum (peppers): 107878107
Help
Entry
107878107 CDS
T04646
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107878107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cann03000
]
107878107
03021 Transcription machinery [BR:
cann03021
]
107878107
Transcription factors [BR:
cann03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
107878107
Transcription machinery [BR:
cann03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107878107
RNA polymerase III system
TFIIIB
107878107
RNA polymerase I system
SL1/TIF-1B
107878107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
107878107
NCBI-ProteinID:
XP_016580479
UniProt:
A0A1U8HIY4
LinkDB
All DBs
Position
1:complement(84348688..84359473)
Genome browser
AA seq
200 aa
AA seq
DB search
MADQALEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaggcattagaggggagccagccagtggatctttccaagcacccttctgga
atagttcctactctccagaatattgtctctacggttaatttggactgcaagttggacctg
aaagctattgcacttcaagctcgaaatgcagagtacaatccaaagcgttttgctgcagtg
atcatgagaattagagaaccaaagactacagcattgatttttgcttctgggaagatggtt
tgtactggagccaaaagtgaacagcagtcaaagttggcagcccggaaatatgctagaatc
attcaaaagcttggttttccagccaagttcaaggattttaagatccagaatatagttggt
tcttgtgatgttaaatttcctattcgacttgaaggccttgcatatgcccatggtgctttt
tcaagttatgagccagaactatttcctggactaatatatcgcatgaaacaaccaaagata
gtgctgcttatttttgtttctgggaaaattgtcatcacaggagccaaggttagagatgag
acatatactgccttcgagaacatatacccagttcttactgagttcaggaagaatcagcaa
tga
DBGET
integrated database retrieval system