Capsicum annuum (peppers): 107878162
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Entry
107878162 CDS
T04646
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107878162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107878162
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107878162
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107878162
NCBI-ProteinID:
XP_016580560
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Position
7:181013491..181022221
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AA seq
471 aa
AA seq
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MQSDLGKLFVGGISWDTNEERLKEYFSTYGEVLEAVIMKDRTTGRARGFGFIVFADPAVA
DRVIKEKHNIDGRMVEAKKAVPRDDQSTISRSSTSIQGSPGPGRTRKIFVGGLASTVTET
DFKQYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPRLGGFNHPLNRINNFLNGYTQGYSPNTVAGYGVRMDGRFSPITGGRSGFA
PFGSGYGMGLNFEPGLSPGYGGSATFNSNLSYGRGLGPYYVNSSNRFGGPIGFDGGNGGN
SSFFSSATRNLWGSGGLGYGTNSTSSSNFAVSGSGSTGAGNFSNTGVWGSSSISSQGRGN
VSNQSNLGYGGDDSLYGLTGGYGRNVTTSGAPTLSYPASNGSYDGALADFYSGGLGYGDS
TWRSANSEQDESGSIGYGLGTAPSDMPPKSSTSYVGSYGVGKRQTYSGLGG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatcttggaaagttattcgttggtggaatatcatgggacactaatgaagag
cggttgaaggagtattttagtacctatggggaggttttagaggctgtaattatgaaggat
aggactactggacgtgcccgtggttttggttttattgtttttgctgatcctgctgttgct
gatagggttatcaaggaaaaacacaatattgatggcaggatggttgaagcaaagaaggct
gttccaagggatgaccagagcacaataagtagaagcagtactagcattcagggttcacct
ggtccaggacgtacaagaaaaatttttgttggaggtttagcatccacggtaactgagact
gactttaagcagtactttgagcaattcggaacaatcaccgatgtagtagttatgtatgac
cacaacactcagagaccaagaggctttgggttcataacttatgattcagaggatgcagtg
gataaagtattgcttaagaccttccatgagctgaatggtaaaatggtcgaggtcaaacgt
gcagtccccaaagagttatcaccaggtccaagactcggtgggtttaaccatccactaaat
aggatcaataacttccttaatggatacacacaaggatactctccgaatacagttgcagga
tatggagtcaggatggatggtagatttagccccattactggaggtaggagtggttttgct
ccatttggttctggttatggaatggggcttaactttgaaccagggttaagcccaggatat
gggggaagtgcaacctttaacagcaacttgagctacggacggggactgggcccttattat
gttaatagttcaaatagatttggtggtcctattgggtttgatggaggaaatggaggaaat
agttcattcttcagctcagcaactcggaatttgtggggaagtgggggtttgggttatgga
acaaactccacaagctctagcaactttgcggtatctggaagtgggagtaccggggcagga
aactttagcaacactggagtttggggttcatcttcaatttcctcccaaggtagaggaaat
gtttctaaccaaagtaatcttggttatgggggtgatgatagtttatatgggttgactgga
ggctatggaagaaatgttacaacaagcggggctcctactttatcatatcctgcatctaat
ggcagctatgatggagctcttgctgatttttacagtggtggtctgggatatggtgattct
acttggcgctctgcaaattctgagcaagatgaatctggctcaattggttatggacttggc
actgcaccctcagacatgccacctaaaagttctactagttatgttggcagttatggtgtt
ggtaaaagacagacatacagcgggctcggtggctag
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