Capsicum annuum (peppers): 107878209
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Entry
107878209 CDS
T04646
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107878209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107878209
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107878209
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107878209
NCBI-ProteinID:
XP_016580616
UniProt:
A0A1U8HB00
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Position
7:complement(185699146..185716997)
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AA seq
338 aa
AA seq
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MENLPESPFSDTTSPSSPSSPSLYKTSSSTYSTVVTQQILPDLGYLTPNQLVLLLHDVKH
REDAIDQLLIKKLHTCKDLAPLLWNSSSAVYMLLLDVIGVYHKLSPSKLSMKESTRVCKA
LALFQVLADNPETRKGLIKAKIPCYFYPLLKPSGDDKPLEYLRLTTLGVLGSLTEFDDPN
GPLVLHFFLETEMVPLCLACMDHCDELSQKVATLILMKILMQEKGMTYCCDGADRFFSIV
QVLNRVVEKLSKKPCWLQLKYVIQCYISFSEVLWLHGPCDVLKKQVPPQLFDKTFKDILR
DDHETTWALQVLHFNIYGRLNVSQIKESNIIANKDTVW
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcttccagagtcaccattttcggatactacatcgccatcatcgccctcttca
ccatccttgtacaagacttcttcttctacttattctaccgtggttacacaacaaatactt
cctgatttaggttatctcactccaaatcaattggtgttgttacttcatgatgttaagcat
cgtgaagatgccattgatcaattactcatcaagaagcttcatacatgcaaagatttagct
ccgctcttgtggaactcctccagtgcagtttacatgcttttgctggatgtcataggagtg
tatcataagttgtcaccctcaaagctatctatgaaggagtcaactcgagtgtgtaaggct
cttgctttgtttcaggtgttggccgataacccagaaacaagaaaggggctcataaaagct
aaaataccatgttatttctacccattactcaaacctagtggagatgacaaacctttggag
tatttgaggctcaccaccttgggtgttcttggttccctaacggagtttgatgatccaaat
ggaccactggtccttcattttttcttggaaacggaaatggttcctttgtgcctagcgtgc
atggatcactgtgatgaactgtcacagaaggttgcaactctcatacttatgaaaattctg
atgcaagagaagggaatgacgtattgttgtgatggggctgatcgcttcttctcgatagta
caggtcttgaaccgagtggtagagaaactttctaaaaaaccttgttggctgcaactaaaa
tatgtaatacaatgttatataagtttttcagaagtattatggctccacgggccatgtgat
gtattaaaaaaacaagttcctcctcagttatttgacaagacctttaaggacattcttcgt
gatgatcacgaaactacatgggcgttgcaggtgctacatttcaatatttatggacgtcta
aatgtttcgcagattaaagagagtaacatcattgcaaataaggataccgtatggtga
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