Capsicum annuum (peppers): 107878359
Help
Entry
107878359 CDS
T04646
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2 isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107878359
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107878359
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107878359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
DUF2921
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
DUF4512
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107878359
NCBI-ProteinID:
XP_016580799
LinkDB
All DBs
Position
7:206340923..206352849
Genome browser
AA seq
565 aa
AA seq
DB search
MGVVKNLSFSRKNYGVWVRIVLYLLVFFRGFCQVKGVRPLRERYRSWGDEQWISARKDEN
DLGPFSAWNITGTFRGSWRFLDSKNGSSLFPEFKKSNGNSVLELISTPTKITGVHYVQGV
IIFHDVFDNVHGGSQIRVEGVYVWPFRQLRMVAHSSKEGDFGQEDDYLLSNPYHLLGTFS
SQVFQESPRDKIWKRKHSPIYEMKKHCNVEIAAQISRVSSSTNDGDQDHYHLEGLMESPP
VDDDEDCFSPMLLNATSINVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAK
VSILMIGQQGIIDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAS
RPMTSGEGWEAMRRELSVLYSRFYGILLSGILILYEFHKFLRPILLLLHSFWIPQIATNV
IRDSRKPLHPHYILGITLTRLAIPLYVFGCPHNFMRIEPDKSWCICLGIFMAVQALVLLS
QHYLGSRWFIPRQILPEKYSYNRRFDHNGNHATDCVICMTAIDLTQRSNNCMVTPCDHFF
HLGCLQRWMDIKMECPTCRRPLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggttaaaaatttgagcttttcaagaaagaattatggggtttgggttagaatt
gtgttgtatttattggttttctttagagggttttgtcaagtaaagggtgtaaggcctctt
agagaaaggtatcgttcgtggggcgatgagcagtggatttctgcgaggaaggatgagaat
gatttggggccattttcagcttggaatataacaggaaccttcagagggtcttggaggttc
ctagattcaaagaatggctcttccctatttcctgaatttaagaaatcgaatggaaactct
gtcctggaattgattagtacccctacaaaaattactggtgtacactatgttcagggtgta
ataattttccatgatgttttcgacaatgtacatgggggctctcaaatcagagtagaaggt
gtatatgtatggccattcagacaacttcggatggtagctcacagcagcaaagagggggac
tttggccaggaagatgattatctgttatcaaatccttatcatttgcttggaactttctca
tcccaggtcttccaagagtcgccgcgagataagatttggaagcggaaacactcgcctatt
tatgagatgaagaagcattgtaatgttgaaattgcagcacaaatttctcgagtgtcatct
tccactaatgatggagatcaagatcattatcatctagaaggattgatggagagccctcca
gtggatgatgatgaagactgtttctctcccatgctattgaatgccacttctatcaatgta
gaggtttactacaataaagcagttaactatacgttgatggtcacctttgtttcttttctt
caagtgctccttctcattcggcaaatggaacatagcaatacccaatcaggtgctgccaaa
gtttcaattttgatgatcgggcaacagggaataattgatgcttatctatgtcttctacat
ctgactgcaggcatacttgttgaatcgctgttcaatgcttttgcaaccgctgcatttttc
aagtttgttgtcttctcaatatttgagatgagatatcttctcgccatatggaaggcaagt
agacctatgactagtggagagggttgggaagcaatgagacgcgaactgtcagttctgtat
agccgcttctatgggattcttttaagtggaattttaatcttgtatgaattccataagttt
ctgcggcctattcttctccttctacactctttttggatacctcaaattgcgaccaacgtt
attcgtgactcaagaaaaccgttgcatcctcattatatcttgggaataactcttactcgg
ctagcaattccactatatgtctttggttgtcctcacaattttatgcgcatagagcccgac
aagagttggtgcatctgcttggggattttcatggcagtgcaggcattggttcttctttcg
cagcattatcttggatctcggtggtttattccacgacagattttacctgaaaaatatagt
tataacagaagatttgaccacaatggaaatcatgccaccgactgtgtcatttgcatgact
gctattgatctcactcaacgttcaaataattgcatggtgacgccctgtgatcatttcttt
catttgggttgtttgcaaagatggatggacataaagatggagtgcccaacatgccgacgc
cctcttcctccagcctga
DBGET
integrated database retrieval system
