Capsicum annuum (peppers): 107878626
Help
Entry
107878626 CDS
T04646
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107878626
Enzymes [BR:
cann01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107878626
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107878626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf_RING_Vps8
zf-RING_UBOX
zf-RING_Vps41
zf-RING_16
zf-ANAPC11
PHD_NSD
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
107878626
NCBI-ProteinID:
XP_047271536
LinkDB
All DBs
Position
7:complement(220353246..220362645)
Genome browser
AA seq
531 aa
AA seq
DB search
MGQRSMSYSNHFMDFGADQQSPAYIHPEPCVLYGSYTAFPHPNAHAIVPAAGIGNLYVSH
LPGQGALIYGMPPANGIQQWQPLPNVSPVIPPPSNPFYPYVAGPSASTGFPVPVDQGLQL
PFPGTDDVVGNNADNLARNDPHVDSVGGSSKQKNVQGSSGNLEHHSASAGASTSVSPVIP
TAHESDVSLSDSVSREHGGNDAAASAENGVQRSASRSASGPETVLPNNSNQLLQGNYVGQ
ANQFPGNPWLNQPFNSNGTQPWAWNQAAPLPYLPGGGGGYVLGAGNVCMPGYQVNSSNGG
LTSSVYPPIHQGPLYPHHLPPNMQFRGGHPLSFSPQMTASSSSHLPNSSSSTANNPLQGV
VEGGSGYMGPFLPTGFRMYRPNQTEFMRETNIHYHNLPNGVRIGFPGVVVADQHRDLRLD
IDHMSYEELLALGERIGNVTTGLSGEAIVTNLKTRIFVSSQTPPAPESVASEDQKTDLCV
ICQTDYTDQEKIGILECGHEYHEECVKKWLIVKNTCAICNSTGLSTEKKNV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaggagtatgtcctacagtaatcacttcatggattttggagcagatcagcag
agtccggcgtatattcatccagagccttgtgtgttgtatgggagctatacagcttttcca
catccaaatgctcatgctattgtaccagctgccgggattggtaatctctatgtgtcccat
ctgccaggccagggcgctttaatttatgggatgccaccggccaatgggattcaacaatgg
caacctctccccaatgttagcccagtgattccaccaccatcaaatcccttttacccttat
gttgctggtccatctgcatctacgggttttccagttccagtagaccaggggttacagctt
ccattcccaggcactgacgacgtcgttggaaataatgcagacaatttagctaggaatgat
ccacatgtggacagtgtcggaggttcatctaagcaaaagaatgttcaaggcagctctgga
aatcttgaacatcattctgcttctgctggtgctagtacttccgtttccccagttatacca
acagcgcatgaatctgatgtttctttgagtgattctgtatcacgcgagcatggggggaat
gacgcagcagcatccgctgaaaatggagtacaaagaagtgcgagcagatctgctagtggt
ccagagactgtattgccaaataacagcaatcagctgcttcaaggaaactatgtaggccaa
gccaatcagtttcctggcaatccttggttgaaccagcctttcaatagtaatggtactcaa
ccatgggcctggaatcaggctgctcctttaccctatctgcctggtggtggcggaggctat
gtactcggtgctggaaacgtgtgcatgccaggttatcaagtaaattccagcaacggaggt
ttgactagttctgtttatccacccattcatcaaggaccactgtaccctcatcatctgcca
cctaatatgcaatttaggggaggccaccctctgagcttctctccacagatgacagcatct
tcaagcagtcaccttccaaacagttcgtccagtactgcaaataatccattgcaaggtgtt
gtagagggagggtctggatatatgggacccttcctgccaactggctttagaatgtacaga
cctaatcagacggaattcatgcgtgaaacaaatatccactaccacaacctccctaatgga
gtgagaatagggttccctggtgtggttgttgctgatcagcacagagatttgcgtttggac
attgatcacatgtcttatgaggagcttcttgcattgggggagcgaattggcaatgtgacg
actggtttatcaggtgaagccattgtcaccaatttgaaaacgagaatatttgtgtcttcc
cagactcctcctgctccggaaagtgttgcaagtgaagatcaaaaaactgatctctgtgtc
atatgtcagactgattacaccgaccaggaaaagattggcattcttgagtgtgggcatgag
tatcatgaagagtgcgttaagaagtggttgattgtgaagaacacttgtgctatatgcaac
tctacagggttgtctacagagaaaaagaacgtgtga
DBGET
integrated database retrieval system
